Gene RPC_3355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3355 
Symbol 
ID3971069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3709724 
End bp3710203 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content61% 
IMG OID637926466 
Producthypothetical protein 
Protein accessionYP_533215 
Protein GI90424845 
COG category[S] Function unknown 
COG ID[COG4852] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.394527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGGCCG CGTGTTGCAA CCTTGGCCGA TTTCGCGCGT ATCTTGGGAA CCGGCTCAGC 
AGCACTGTGG AGGACGACTT GAAGCGATAT GCAATTCTCT ATCTGGCGAC GTTCCTGATC
CTGATCCCGC TGGATTTCCT GTTTCTCGGC ACCATCGCCA AGAACTTCTT CTTCGCCCAG
GTCGGCGACA TGCTGGGCGA GGTCCGGCTT TCGGCGGCGA TCCCGTTCTA TTTGCTCTAC
ATCGTCGGCG TGCTGGTGTT CGTGAACGGC GGCCGCGACG CCACCTGGTC GTCGACGCTG
GTCTATGGCG CGCTGTTCGG CATGTTCTGC TACGCGACGT TCGAGCTGAC CGCGATGTCG
TTGCTCAAGC ACTGGACCTG GCCGGTGGTG GCGCTCGACA TTTCATGGGG GGCGTTCATG
ACCGCGGTGT CGGCGACGCT CGGACTGCTG ATCACCAACT GGCTGGCGCC CAAGCTGTAG
 
Protein sequence
MLAACCNLGR FRAYLGNRLS STVEDDLKRY AILYLATFLI LIPLDFLFLG TIAKNFFFAQ 
VGDMLGEVRL SAAIPFYLLY IVGVLVFVNG GRDATWSSTL VYGALFGMFC YATFELTAMS
LLKHWTWPVV ALDISWGAFM TAVSATLGLL ITNWLAPKL