| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3342 |
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| Symbol | |
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| ID | 3973452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3699848 |
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| End bp | 3701140 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637926453 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_533203 |
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| Protein GI | 90424833 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.313292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGGTA AAGGATCGGT CGGCCAGCGG GCCCGACACT GGGCAACGTT GTGCTTCGGC
CTTGCGGCTG CGACCGGCTG CTTCGGGCTC AATTCGGCAT CGGCCGGCGG TTGTCCCGGC
AACCCCGATG CGCTCGGCAC CTCCCGCACT TTGGTGGTCG ATCCGCGCGA ACATCCGCGC
ATCGGCACCA TGCAATATGC CGAAACCTTG CCGCTGCAGG ACCACGAGGT GGTGCTGACT
TTCGACGACG GGCCGATTCC GCGTCACAGC AACGAGGTGT TGGAGATTCT GTCCGCGCAA
TGCGTCAAGG CGACGTTCTT CGTGGTCGGT CGAATGGCCC AGGAGCATCC TCAGGGCGTC
CGCAAGCTGC GCGACGCCGG CCACACCATC GGCACCCACA GCCAGAACCA CCCGCTGAGC
ATGAACCGGA TGTCGCTGGA GCAGGCCAAG CAGGAGGTCG ACGCCGGCAT CGCCTCGACC
GCCGCCGCGC TCGGCGACGA CAAGGCGCTG GCGCCGTTCT TTCGGATCCC GGGGCTGCTA
CGGGCCGCAG CGGTGGAGGA ATATCTCGCT TCGCAAGGCA TCCAGACTTG GAGCGCGGAT
TTTCCAGCCG ACGACTGGCG GCACATTTCG CCGGCCCAAG TCTACGACAC GGCGATGCGC
CGGCTCGAGG CCAAGGGCAA GGGCATCCTG CTGCTGCACG ATATCCAGCA GCGGACCGCG
GTCGCGCTGC CGCGTATCCT GCAGCAATTG AAGGCGCGCG GTTACCGGAT CGTCCATGTG
GTGCCGGCGA CGGCGGAACG GCCGGCAACT CCGACCGAGC CTGGCCAATG GCGTTTGCAT
CCGATCACCG AGACGGTGGC CACCTCGCAT TGGCCGAAGG TCCCGCACTT CGTATTTGCC
AATGCGCAGA TGCTGCCGGC CCCGGTGCTG TCGGAGTCCG ATGTGCACGA CGGCGGCCTG
GTGGCGCCGG GCTCCAGCCG CCCGCGCCGT CTGGCGCGCG GCGCCGTGCC GCTGCCGGAA
GCCGCGCCCT GGCCGCGGCA CTGGCCGCTG CAGCCGACGA GTGCCTCGAC CGATATGCCG
GTCCCGGCCC GCGACGTCTT CCAGGTTCCT GAGAGCATTC ATGCCGAGGT CAAAGCACTG
AGCGCGTTGC GGCGTCACGC CGTTGCAATC GAACCCGCAG CCCCCGCCCC TGATGCGGTG
GCGGAGGGCG GACTGCATCG GCGGCTCGAT CTGCCCGCGC ATCCCAGCGA GCTCACCAGC
CAATCGCGGC GCGCCGAACC CGCGGCGCAA TAA
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| Protein sequence | MSGKGSVGQR ARHWATLCFG LAAATGCFGL NSASAGGCPG NPDALGTSRT LVVDPREHPR
IGTMQYAETL PLQDHEVVLT FDDGPIPRHS NEVLEILSAQ CVKATFFVVG RMAQEHPQGV
RKLRDAGHTI GTHSQNHPLS MNRMSLEQAK QEVDAGIAST AAALGDDKAL APFFRIPGLL
RAAAVEEYLA SQGIQTWSAD FPADDWRHIS PAQVYDTAMR RLEAKGKGIL LLHDIQQRTA
VALPRILQQL KARGYRIVHV VPATAERPAT PTEPGQWRLH PITETVATSH WPKVPHFVFA
NAQMLPAPVL SESDVHDGGL VAPGSSRPRR LARGAVPLPE AAPWPRHWPL QPTSASTDMP
VPARDVFQVP ESIHAEVKAL SALRRHAVAI EPAAPAPDAV AEGGLHRRLD LPAHPSELTS
QSRRAEPAAQ
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