Gene RPC_3338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3338 
Symbol 
ID3973448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3695584 
End bp3696378 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content68% 
IMG OID637926449 
Producthypothetical protein 
Protein accessionYP_533199 
Protein GI90424829 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTTCA CGGCTTCCAA AATCGTCGGA TTCTTCGCGG TGCCGTCGAA CGCGATCGTG 
ATGATCTGCG TGCTCGGCGC GGTGCTGCTG CCGACCCGCT GGCGCCGCGG CGGACTGCGC
ATCCTGACGC TGGGATTGGC GCTGTTGCTG ATCGCCGGGT TTTCGCCGCT CGGCAATGTG
CTGCTGCTGT CGCTCACCGA GCGGTTTCCG GCCTGGCAGG CAGACGGCCG CGCGCCGGAT
GGCGTGATCG TTCTCGGTGG CTCCATCGAT GCCGAGGTCT CGACGGCGCG CAATGCGCTG
GAACTCGATG CGTCGGCGGA GCGGATCGTG GTGATGTTGC AGTTGGCGCG GCGGTTTCCC
GACGCGCGGA TCGTGTTCAG CGGCGGCAGC GCCAACCTGT TGCAGGCGCC GGTGGCCGAG
GCGCCGATCG CCGGCCGGTT GCTGCATAGC TTCGGGATCG CGCCCGAACG CATCGTTCTG
GAAGACCGTT CGCGGACCAC GGCGGAGAAT GCCGCCTTCA CCCGGGCGTT GGTGACACCG
GCCGCCGGCG AGCGTTGGCT GCTGGTGACC TCGGCGTTTC ACATGCCGCG GTCGATCGCC
GCGTTCCGTG CGGTCGGCTT CGATGTCGAG GCCTATCCGG TCGATTGGCG CACCCGCGGC
TGGATTGATG CGGCGATGCC GTTCGATAGG CTCAGCGCCG GGTTGGCGCG GACCGACGTC
GCAGTCCACG AGTGGGTTGG TCTGATCGCC TATCGGTTGG CCGGGCGGAG CAGCCAACTG
ATGCCGGGAC CGTAG
 
Protein sequence
MFFTASKIVG FFAVPSNAIV MICVLGAVLL PTRWRRGGLR ILTLGLALLL IAGFSPLGNV 
LLLSLTERFP AWQADGRAPD GVIVLGGSID AEVSTARNAL ELDASAERIV VMLQLARRFP
DARIVFSGGS ANLLQAPVAE APIAGRLLHS FGIAPERIVL EDRSRTTAEN AAFTRALVTP
AAGERWLLVT SAFHMPRSIA AFRAVGFDVE AYPVDWRTRG WIDAAMPFDR LSAGLARTDV
AVHEWVGLIA YRLAGRSSQL MPGP