| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3324 |
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| Symbol | |
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| ID | 3973011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3681021 |
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| End bp | 3683429 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637926435 |
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| Product | ATPase AAA-2 |
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| Protein accession | YP_533185 |
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| Protein GI | 90424815 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.660332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACAT TTTCACAGAG CCTTGAGCAA TCCCTGCACC GCGCCCTCGC GATCGCGAAC
GAGCGCCATC ACCAATATGC GACGCTCGAG CATTTGCTGC TCTCGCTGGT GGACGACTCC
GATGCCGCGG CAGTGATGCG GGCCTGCAGC GTCGATCTCG ACAAGTTGCG CACCAGCCTC
GTCAATTATC TCGAGACCGA ATTCGAGAAC CTGGTGACCG ACGGCGCCGA CGACGCCAAG
CCGACCGCCG GCTTCCAAAG GGTGATCCAG CGCGCGGTGA TCCACGTGCA GTCGTCCGGC
CGCGAAGAGG TCACCGGCGC CAACGTGCTG ATCGCGATCT TCGCCGAGCG CGAAAGCCAC
GCCGCGTATT TCCTGCAGGA GCAGGACATG ACGCGCTACG ACGCCGTCAA TTACATCAGC
CATGGCATCG CCAAGCGGCC CGGAGTGTCC GAGGCGCGGC CGGTGCGCGG GGTTGATGAG
GAGACCGAGA CCAAGGGTGG CGAGGACAGC AAAAAGAAAG GTGACGCTTT GGACACCTAT
TGCGTCAACC TCAACAAGAA GGCCCGCGAC GGCAAGATCG ATCCGGTGAT CGGCCGTAAT
GTCGAAATCA ACCGCGCGAT CCAGGTGCTG TGTCGCCGGC AGAAGAACAA CCCGCTGTTC
GTCGGCGAAG CCGGCGTCGG CAAGACCGCT ATTGCAGAGG GCCTCGCCAA GCGCATCGTC
GACTCGGAAG TGCCGGAGGT GCTGGCCGCC GCAACCGTGT TCTCGCTGGA CATGGGCACG
CTGCTCGCCG GCACGCGGTA TCGCGGCGAC TTCGAAGAAC GCCTGAAGCA GGTGTTGAAG
GAGCTGGAAG CGCATCCCAA CGCGATCCTG TTCATCGACG AGATCCATAC CGTGATCGGC
GCCGGCGCCA CCTCCGGCGG CGCGATGGAT GCCTCGAATC TGCTCAAGCC TGCCCTCGCA
TCGGGCACCA TCCGCTGCAT GGGATCGACC ACCTATAAGG AATACCGCCA GCACTTCGAG
AAGGACCGCG CTTTGGTGCG CCGGTTCCAG AAGATCGACG TCAACGAGCC GACCGTCGAA
GACGCGATCG CGATCCTCAA GGGGCTGAAG CCGTATTTCG AGGACTACCA CAAGCTGAAA
TACACCAACG AGGCGATCGA GTCGGCGGTG CAGCTGTCGT CGCGCTACAT CCACGACCGC
AAACTGCCCG ACAAGGCGAT CGACGTGATC GACGAATCCG GCGCGGCGCA GATGCTGGTG
GCGGAGAACA AGCGCAAGAA GACTATCGGC ATCAAGGAAA TCGAGGCCAC GGTTGCGACC
ATGGCGCGGA TCCCGCCGAA GAGCGTGTCA AAGGACGACG CCGAGGTGCT GAAACATCTC
GAAACCACCC TGAAGCGCGT CGTGTTCGGT CAGGATAAGG CGATCGAGGC TTTGGCCGCG
TCGATCAAGC TGGCGCGCGC CGGCCTGCGC GAACCGGAAA AGCCGATCGG CTCCTATTTG
TTCTCCGGCC CGACCGGCGT CGGCAAGACC GAAGTGGCCA AGCAATTGGC GGCCTCGCTC
GGCGTCGAGC TGATCCGCTT CGACATGTCG GAATACATGG AGCGGCATAC CGTCTCGCGG
CTGATCGGCG CGCCTCCGGG CTATGTCGGC TTCGATCAGG GCGGCCTTTT GACCGACGGC
GTCGATCAGC ATCCGCATTG CGTGGTGCTG CTCGACGAAA TCGAGAAGGC GCATCCGGAT
CTCTACAACG TGCTGTTGCA GATCATGGAT CACGGCCGGC TGACCGACCA TAACGGCAAG
CAGGTCAACT TCCGCAACGT GATCCTGATC ATGACGACGA ATGCCGGCGC TGCCGATCTG
GCGCGGCAGG CGTTCGGCTT CACCCGCAAC AAGCGGGAAG GCGACGACCA TGAGGCGATC
AACCGGCAGT TCGCGCCGGA ATTCCGCAAC CGTCTCGATG CCATCGTCTC GTTCGCGCAT
CTCAATGCCG ACGTCATCGG CATGGTGGTG GAGAAGTTCG TGCTGCAGCT CGAGGTGCAG
CTCGCCGATC GCGACGTCAC CATCGAACTG TCCGAGCCCG CCAAGGCCTG GCTGGTGCAG
CATGGCTACG ACGAGCAGAT GGGCGCGCGG CCGATGTCGC GGGTGATCCA GGAGCACATC
AAGAAGCCGT TGGCCGACGA GGTGCTGTTC GGCCGGCTGA AGGGCGGCGG TCACGTCCGC
GTCGTGCTGA TCAAGGACGA AGCGGTGGCC GGGGTCGATC TGGAGAAGAT CGGCTTCGAA
TATCTCGAAG GCCCGGTGAC GCCGAAGCCG GAGAAGCTGC CGGGCGCCCG CAAGCGCAGC
GTCCGCAAGC CGAAATCCGG CGGCGGCTCC GACGGGCCGT CCTCGAAGGG ACCGCTGGTC
AAGGTGTGA
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| Protein sequence | MPTFSQSLEQ SLHRALAIAN ERHHQYATLE HLLLSLVDDS DAAAVMRACS VDLDKLRTSL
VNYLETEFEN LVTDGADDAK PTAGFQRVIQ RAVIHVQSSG REEVTGANVL IAIFAERESH
AAYFLQEQDM TRYDAVNYIS HGIAKRPGVS EARPVRGVDE ETETKGGEDS KKKGDALDTY
CVNLNKKARD GKIDPVIGRN VEINRAIQVL CRRQKNNPLF VGEAGVGKTA IAEGLAKRIV
DSEVPEVLAA ATVFSLDMGT LLAGTRYRGD FEERLKQVLK ELEAHPNAIL FIDEIHTVIG
AGATSGGAMD ASNLLKPALA SGTIRCMGST TYKEYRQHFE KDRALVRRFQ KIDVNEPTVE
DAIAILKGLK PYFEDYHKLK YTNEAIESAV QLSSRYIHDR KLPDKAIDVI DESGAAQMLV
AENKRKKTIG IKEIEATVAT MARIPPKSVS KDDAEVLKHL ETTLKRVVFG QDKAIEALAA
SIKLARAGLR EPEKPIGSYL FSGPTGVGKT EVAKQLAASL GVELIRFDMS EYMERHTVSR
LIGAPPGYVG FDQGGLLTDG VDQHPHCVVL LDEIEKAHPD LYNVLLQIMD HGRLTDHNGK
QVNFRNVILI MTTNAGAADL ARQAFGFTRN KREGDDHEAI NRQFAPEFRN RLDAIVSFAH
LNADVIGMVV EKFVLQLEVQ LADRDVTIEL SEPAKAWLVQ HGYDEQMGAR PMSRVIQEHI
KKPLADEVLF GRLKGGGHVR VVLIKDEAVA GVDLEKIGFE YLEGPVTPKP EKLPGARKRS
VRKPKSGGGS DGPSSKGPLV KV
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