| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3301 |
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| Symbol | ddl |
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| ID | 3972566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3658655 |
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| End bp | 3659581 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637926412 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_533162 |
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| Protein GI | 90424792 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACAAAAC GCAAGCACGT CGCGGTTCTG CTCGGCGGCT GGTCGTCCGA GCGGGAGGTT
TCGTTGCGCT CGGGCAAAGC CTGCGCCGAC GCGCTGGAGC GCTGCGGTTA TCAAGTGACG
CGGGTCGACG TGCAGCGCAA CATCGGCACC GTGCTCGACC AGTTGAAGCC GGACGTCGCC
TTGGTGATGC TGCACGGCCG TCCTGGCGAG GACGGCACCA TCCAGGGCGT GCTGGAGACC
TTGGGAATTC CTTATAGCCA CTCCGGGGTG CTGGCTTCCG CGTTGGCGAT GCAGAAGGAT
CTGGCCAAGA CCGTGATGGC GACCGCCGGG GTGCCGGTGG CGGAGGGGCT GACGCTGTCG
CGCGCCGAGG TCGCCAAACG CCATGTGATG GCGCCGCCCT ATGTCATCAA GCCGGTCGCC
GACGGCTCCA GCGTCGGAGT CTTTATGGTG ACCGAGGCCC ATGAGCATCC GCCGCAGGAA
TTGTTCCGCG ACGACTGGCC CCATGGCGAG CAACTGCTGG TTGAAAAATA CGTCGCCGGC
AAGGAGTTGA CCTGCGCCGT GGTCAAGGGC GAGCCGACCG GGGTGATCGA GATCGTGCAG
ACCAACAAAT TCTACGATTA CGAGGCAAAG TATTCTCCGG GCGGGTCAAA TCACATCCTG
CCTGCATCTC TTTTACCATT TGTTTACCAG GAGGTCCGAA GGTTAACGCT GGCGGCGCAT
GTGGCGCTCG GCTGCCGGGG CGTTAGCCGG GCGGATTTCC GCTTCGACGA CCGCATCGAG
GGAACGGCTG GCCTCATCTG CCTTGAGGTC AACACCCAAC CCGGCATGAC CGAGACGTCA
CTTGTGCCAG AGCTCGCAGC GGATGCGGGC ATAACATTTG ACGAGCTCGT GCAATGGATG
GTGGAGGACG CCTCGCTCGG TCGGTAA
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| Protein sequence | MTKRKHVAVL LGGWSSEREV SLRSGKACAD ALERCGYQVT RVDVQRNIGT VLDQLKPDVA
LVMLHGRPGE DGTIQGVLET LGIPYSHSGV LASALAMQKD LAKTVMATAG VPVAEGLTLS
RAEVAKRHVM APPYVIKPVA DGSSVGVFMV TEAHEHPPQE LFRDDWPHGE QLLVEKYVAG
KELTCAVVKG EPTGVIEIVQ TNKFYDYEAK YSPGGSNHIL PASLLPFVYQ EVRRLTLAAH
VALGCRGVSR ADFRFDDRIE GTAGLICLEV NTQPGMTETS LVPELAADAG ITFDELVQWM
VEDASLGR
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