| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3297 |
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| Symbol | lpxC |
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| ID | 3972562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3653200 |
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| End bp | 3654159 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637926408 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_533158 |
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| Protein GI | 90424788 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.577274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTCA GTCGTCAGAC CACGCTTCGT TCGCAGGCCA CGGTGACGGG CGTCGGTGTC
CATTCCGGCC TTCCCGTGAA TCTCACCATT GGACCCGCGG ATGTTAACGC GGGTTTTATT
TTTGTCCGCA GCGGTCTGGA AGGTTGTGAT CGGGAAGTGC GCGCCTCGGC GAAGTCGGTG
ATTGCCACCG AGCTTGCCAC GGTGCTGGGC GACACCGACG GCCCGCTGGT CTCCACCGCC
GAACACGTTC TCGCCGCGTT GCGCGGCATG GGCATCGACA ATGCCATCAT CGAAGTCGAC
GGCCCCGAAG TTCCGATCAT GGACGGCAGC GCCGCCGCCT TCGTCGCCGC GATCGATCAG
GCTGGCATCC GCGAACAATC GGCGCCGCGC CGTTTCATTC AGGTCTTGAA GCCGGTGCAG
GTCGCGATCG GCGACTCCTT CGGCGAGTTG CGGCCTCACG CGAGTGGCTT CCGCGCCGAA
GTCGAAATCG ACTTCGCCCA TCCGCTGATC GGCCGCCAGA ATTACATTCT CAATCTCAGC
CCGGAAAACT TCCGCCGCGA AGTTTGTCGC GCCCGCACCT TCGGCAGCAT GAGCGACGTG
GCACGGCTGT GGAGCCTGGG TTACGCGCTC GGCGCCTCGT TCGACAATTC CATCGTGTTC
GACGACACCC GCATGCTCAA CACCGAAGGC CTGCGTTACG TCGACGAATG CGCGCGCCAC
AAGGTGCTCG ACGCGGTCGG CGATCTGGCG CTGGCCGGTC TGCCACTGCT CGGCGCCTAT
CGCTCGGTGC GCGGCGGCCA CAAGCTCAAC CACGCCGTAT TGACCGCGTT GCTGGCCGAT
CACAGCGCCT GGCGGGTGAT CGAGGCCGAA CCGGCGCGGC GTCCGCGCGG TCACGCCGAG
GTCGTCAGCG GCATGCTCGG CGGCATGGTG GCCCCGGCCT ACGGTCCCGA CGTCTCCTGA
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| Protein sequence | MKFSRQTTLR SQATVTGVGV HSGLPVNLTI GPADVNAGFI FVRSGLEGCD REVRASAKSV
IATELATVLG DTDGPLVSTA EHVLAALRGM GIDNAIIEVD GPEVPIMDGS AAAFVAAIDQ
AGIREQSAPR RFIQVLKPVQ VAIGDSFGEL RPHASGFRAE VEIDFAHPLI GRQNYILNLS
PENFRREVCR ARTFGSMSDV ARLWSLGYAL GASFDNSIVF DDTRMLNTEG LRYVDECARH
KVLDAVGDLA LAGLPLLGAY RSVRGGHKLN HAVLTALLAD HSAWRVIEAE PARRPRGHAE
VVSGMLGGMV APAYGPDVS
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