| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3291 |
|---|
| Symbol | |
|---|
| ID | 3972556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 3643183 |
|---|
| End bp | 3645009 |
|---|
| Gene Length | 1827 bp |
|---|
| Protein Length | 608 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637926402 |
|---|
| Product | peptidase M24 |
|---|
| Protein accession | YP_533152 |
|---|
| Protein GI | 90424782 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0006] Xaa-Pro aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAAG CGCTTTTTCA GACCTTCGAA GAGCCTGACA GCGGCGTCGC GCTGACCGCG
CGGCTCGCCG CCTTTCGCGA GGAATTGCTG CGGCGCAAGC TCAGCGGATT CGTGATTCCC
CGCGCCGATC AGCAACAAAA TGAATATGTC GCGCCGTCCG AAGAGCGGCT GGCGTGGATC
TGCGGCTTCA CCGGATCGGC CGGTCTGGCG ATCGTGCTGG TCGCCGAAGC CGCAGTGTTT
GTCGATGGCC GCTATACGCT GCAGGCAGCC CAACAGGTCG ACGGCCGGGC CTGGAGTGTC
CAACCCCTGG TTGAACCTCC GCCGGAAAAC TGGCTTGGCG CGCATCTCAA ACCGGGTGAC
CGCCTCGGAT TTGATCCGTG GCTGCACACT TCCGCGGCAG CCGAGCGGCT TGCCCAGGCC
TGCGCCAAGG CCGGCGCCGA GCTTGTCGCG GTCGACAGCA ACCCGCTCGA CGCGGTGTGG
GTGGAGCGTC CGGCGCCGCC GCTCGGGCCG GTGGCGGTGC ACGGTCTGCA ATTTGCCGGC
GAAAGCGAAG CCGACAAGCT GGCGCGGATC CGCGCTGAGC TCGGGCCGCT TGGCGCCGAC
GCCCTGGTGC TGTCGGATTC CCACGCGGTG GCCTGGACCT TCAACATCCG CGGCGCCGAC
GTCTCGCACA CGCCATTGCC GCTGTCCTAT GCGCTGCTGC CGCGCGACGG ACGGCCGACC
ATCTTCATCG ACGCCCGCAA GCTGTCGAAC AGCGCACGCG ATCATCTCGA GCACAGCGCC
GAGGTGAAAG AGCCCGACGC CTTGACGCCC GCGCTGCAGA CGCTGGCGCA AACCGGCGCG
GCGATCGCGC TCGATAGCGC CACCGCCGCC GACGCGCTGA CCCGGCTGAT CACCGCGGCC
GGCGGCAAGC CGCTGCGCGG CGCCGACCCG GTGACGCTGC TGAAGGCGGT GAAGAACCCA
ACCGAGATCG CAGGTACCAA GACCGCGCAT CGCCGCGACG CGGTGGCGCT GGCACGGTTT
CTCGCCTTCA TCGACCGCGA GGCGCCCTCC GGCAAGCTGA CCGAGATCGA CGCCGTGGAG
GCGCTGGAGA GCTTCCGCCG CGACACCGGC GCCTTGAAGG ACGTCTCCTT CCCCACCATT
TCCGGCACCG GCCCGAACGG CGCCATCGTG CATTACCGCG TCACCCGCAA GTCCAACCGC
CGGATCGCGC CGGGCGACCT CTTGCTGATC GATTCCGGCG CGCAATATCA GGACGGCACC
ACCGACGTCA CCCGCACCAT CGCGATCGGC GAGCCGAGCG CGGAAATGCG CGACCGCTTC
ACCCGGGTAC TGCGCGGCCA CATCGCGCTG GCGCGCGCGG TCTTTCCCGA CGGCAGCACC
GGCGCGCAGC TCGATACGTT GGCGCGGCAA TTTCTCTGGC AGGCCGGGAT CGATTTCGAG
CACGGCACCG GCCACGGCGT CGGCAGCTAT CTGTCGGTGC ATGAAGGCCC GGCGCGGATC
TCTAAGCTCG GCACCACGCC GCTGAAGCGC GGCATGATCC TGTCCAACGA GCCGGGCTAC
TACAAGGCCG GCTCGTTCGG CATCCGGATC GAGAACCTGG AACTGGTAGT CGAGGCCGCG
ATCGTCGGCG CCGAAAAGCC GATGAACGGG TTCGAGACGC TGACGCTGGC GCCGATCGAT
CGAAGGCTGA TCGATGTTTG TTCGCTCAGC GACGCCGAGA TCGGCTGGCT CGACGACTAT
CACGCGCGGG TTCGGCATGA CGTGCGGCCG CAACTCGACG AAGCCACCAA GGTCTGGCTC
GACGCCGCGA CGCAGCCGCT GGCCTAA
|
|---|
| Protein sequence | MFEALFQTFE EPDSGVALTA RLAAFREELL RRKLSGFVIP RADQQQNEYV APSEERLAWI
CGFTGSAGLA IVLVAEAAVF VDGRYTLQAA QQVDGRAWSV QPLVEPPPEN WLGAHLKPGD
RLGFDPWLHT SAAAERLAQA CAKAGAELVA VDSNPLDAVW VERPAPPLGP VAVHGLQFAG
ESEADKLARI RAELGPLGAD ALVLSDSHAV AWTFNIRGAD VSHTPLPLSY ALLPRDGRPT
IFIDARKLSN SARDHLEHSA EVKEPDALTP ALQTLAQTGA AIALDSATAA DALTRLITAA
GGKPLRGADP VTLLKAVKNP TEIAGTKTAH RRDAVALARF LAFIDREAPS GKLTEIDAVE
ALESFRRDTG ALKDVSFPTI SGTGPNGAIV HYRVTRKSNR RIAPGDLLLI DSGAQYQDGT
TDVTRTIAIG EPSAEMRDRF TRVLRGHIAL ARAVFPDGST GAQLDTLARQ FLWQAGIDFE
HGTGHGVGSY LSVHEGPARI SKLGTTPLKR GMILSNEPGY YKAGSFGIRI ENLELVVEAA
IVGAEKPMNG FETLTLAPID RRLIDVCSLS DAEIGWLDDY HARVRHDVRP QLDEATKVWL
DAATQPLA
|
|---|
| |