Gene RPC_3289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3289 
Symbol 
ID3971745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3640886 
End bp3641827 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content53% 
IMG OID637926400 
Producthypothetical protein 
Protein accessionYP_533150 
Protein GI90424780 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.579597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGTG CACAACTCCT GTATAAGCCG GTGCACAACG TCTTGACGAC CTGGGGAAAT 
TCTATTGGCC AGCTTGTCGG AACCAGCTGC TTTGGCGGGT TGTTAATAGA AAGGACAGTG
ATATATCCTG TCCGAGTGGT CGGGAGGTCC GCCGTCGTGG ACCGTTGGAA TCTTTATTCC
ACCCGGCCGC CTTTTTTTGC CATGCACCTC CTCTATTTGG ACGATTCCGG CTCTGTAACC
ACCGCATCGG ACCGGCACAT TGTTCTAGCC GGGCTGTGCG TATTCGAGCG ACAGCCGCAT
TGGTTCGCCA GCAATTTAGA CGACATAGCC ACGAAGCTCT GGCCGGAAAG CCCGCAAAGC
CTTGAGTTCC GCGGGGCGGA TATCCTCGGC GGCAAGAAGC ATTGGCGCGG CATCGGAAAG
GAGGACCGGA TTAAAGCGTA TCGAGACGCG CTTGGCATTC TCGGAAAATC GAACCAAGTC
ACATTATTTG GGGCTGCGAT ACACAAAGCA GCCATCTCGC CTGCTGACCC GATGGAATAT
GCTTTTGAGC AGGTGTGCAA CCGCTTTGAC CGATTTCTCG GAAGACTCCA CAAGGCAGAT
AACACTCAGC GCGGTCTGAT TATCTTAGAC AAGACGACAT ATGAAACATC TTTACAGGGT
CTAGCTAGAA ATTTCAGGAC AGTTGGGCAT CGGTGGGGTC AACTATACAA TCTGGCTGAC
GTGCCAATGT TTGTTGATTC AAAAGCGACA CGGCTAGTCC AATACGCAGA CTTGGTAGCC
CATGCTATTC GTAAATATTA CGAGAATGGC GATGCGTCGT TATTCGACAT AATCGCTCCA
AAATTCGACG CGGTTGGTGG GGTGTTGCAC GGGTTGGTGC ACTTCACCCC TGTCGGCGCT
CAGTGCAATT GCCGACATTG CAGGCAACGC AAGGCCCACT AA
 
Protein sequence
MSCAQLLYKP VHNVLTTWGN SIGQLVGTSC FGGLLIERTV IYPVRVVGRS AVVDRWNLYS 
TRPPFFAMHL LYLDDSGSVT TASDRHIVLA GLCVFERQPH WFASNLDDIA TKLWPESPQS
LEFRGADILG GKKHWRGIGK EDRIKAYRDA LGILGKSNQV TLFGAAIHKA AISPADPMEY
AFEQVCNRFD RFLGRLHKAD NTQRGLIILD KTTYETSLQG LARNFRTVGH RWGQLYNLAD
VPMFVDSKAT RLVQYADLVA HAIRKYYENG DASLFDIIAP KFDAVGGVLH GLVHFTPVGA
QCNCRHCRQR KAH