Gene RPC_3277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3277 
Symbol 
ID3971733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3628469 
End bp3628999 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content65% 
IMG OID637926388 
Producthypothetical protein 
Protein accessionYP_533138 
Protein GI90424768 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.567089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.787779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGG ATGCCGCCAA CGATCTCAAC GCCGACGATC TCGGCCTGCT GCCGGTTCCG 
TTCGTGGCCT CGGTGATGCC GATCGAGCCG GAATGGATCG ACTACAACGG CCATCTCAAC
ATGGCTTATT ATAACGTGCT GTTCGACCGC GCGATCGACG AGCTGTGGCT GCATCTCGGG
ATCGGCGCGG ACTACCTGAC GACGCGCGGC GGCTCGACCT TCACCGCGGA ATGCCACGTG
CGCTACCTGC GCGAACTGCA TCTCGGCGAT CCGGCGCAGG TTTCGATTCT GCTGATCGAG
GCCGACGACA AGCGGCTGCA TACCTTCGAG GAGTTGCGCC ACGCCACCGA AGGCTGGCTC
TCCGCCACCT CGGAGAACAT GACGCTTCAC GTCGACATGA CCTCCCGCAA GACCGCGCCG
TTCCCGCCCG ATATCCGCGC CCGGATTCAG GCGGTGGCCG AGGCCCATCA CGGCGTGACA
CGGCCCGAAG GCATCGGCCG CAGCGTGGCG ATGCCTGCGA AGCGCGCCTA A
 
Protein sequence
MTLDAANDLN ADDLGLLPVP FVASVMPIEP EWIDYNGHLN MAYYNVLFDR AIDELWLHLG 
IGADYLTTRG GSTFTAECHV RYLRELHLGD PAQVSILLIE ADDKRLHTFE ELRHATEGWL
SATSENMTLH VDMTSRKTAP FPPDIRARIQ AVAEAHHGVT RPEGIGRSVA MPAKRA