Gene RPC_3269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3269 
Symbol 
ID3971781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3617311 
End bp3618090 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content67% 
IMG OID637926380 
Producthypothetical protein 
Protein accessionYP_533130 
Protein GI90424760 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.170183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.426633 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATA CGCTCGGTCG CTCGTCCGAT CAAACACGTC CGAGGTCGAG CGGCTGGAAT 
GTCTCCGGGG CGCTGGCGGT GCTGCTGCTG GCGCTCGCTC CGCAGATCGT TCATGTGCTG
AGGGCGATCG CCGGGCTGAT GTTTCGCGCG CCGATCGGCG ATCCGGCTCA GATCGCATTC
GACCATGGCG CGGCCTTGGT TGCGGCGCTG CCGGCGCTGC TGCTGTCGCA ATTTGCAACG
TCGGACCATC CGCTGTCGTC CGATGTGGTA TTGGCGCTGA CCTACTCCTA TCCGCTGTTC
GCCCTCGCGG TGCTGACATC GTTCGCTCGG CTGCGCGGGC CGCAGGACTA TTATGGCGGC
ATCGTGCTGA TTGCGATCGC CGGCTTCGCG CTGTGGGCGT CGAGCGATCT CGCCGGGATG
CACGGATTTT CGTTCGGCCC CGGCACCGCG CCGCGGATGT TCGGCGTATT GCTGATGGGC
CTGGGGGCGG CGATCGTCGC GGTCGGGCTG TTCACCGAAG GCCCGGCGCT CGCCGCCTAT
GCCTGGCGCG GCCCGCTGTT TGTATCGCTG GCGATCCTGT GCTTTGCGGT CGCGATCCGG
CCGCTCGGCC TGGTGATCTC GGCCTTCGCC AGCTTCATGA TCGCAGCGCT CGGCACCGCG
GAAATCCGCT GGCGGCAAAC CACCCTTGTC GGGCTCTGTC TCACCGCCTG CTGCAGTCTG
CTGTTTCCTT ACGGCCTCGG TCTGCCGTTG GCGCTGCTCC CACGTTTTCT GACCCCGTGA
 
Protein sequence
MADTLGRSSD QTRPRSSGWN VSGALAVLLL ALAPQIVHVL RAIAGLMFRA PIGDPAQIAF 
DHGAALVAAL PALLLSQFAT SDHPLSSDVV LALTYSYPLF ALAVLTSFAR LRGPQDYYGG
IVLIAIAGFA LWASSDLAGM HGFSFGPGTA PRMFGVLLMG LGAAIVAVGL FTEGPALAAY
AWRGPLFVSL AILCFAVAIR PLGLVISAFA SFMIAALGTA EIRWRQTTLV GLCLTACCSL
LFPYGLGLPL ALLPRFLTP