| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3266 |
|---|
| Symbol | thyA |
|---|
| ID | 3971778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 3613744 |
|---|
| End bp | 3614538 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637926377 |
|---|
| Product | thymidylate synthase |
|---|
| Protein accession | YP_533127 |
|---|
| Protein GI | 90424757 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0207] Thymidylate synthase |
|---|
| TIGRFAM ID | [TIGR03284] thymidylate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.394281 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.266288 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGT ATCACGACCT GCTCCAACGG ATTCTCGGCG AGGGCGCCGA GAAGCACGAC
CGCACCGGCA CCGGCACGCT GTCGGTGTTC GGGCATCAGA TGCGCTTTGC GCTCGACGCC
GGCTTTCCGA TGCTCACCAC CAAGCGGCTG CCGCTCAAGG CCATCGTGCA TGAATTGCTC
TGGTTCCTGA AGGGCGACAC CAACATCAAA TATCTCAAGG ACCACGGCGT CTCGATCTGG
GACGAATGGG CCGACGAGAA CGGCGATCTC GGGCCGGTCT ACGGCTCGCA ATGGCGCTCC
TGGCCGGCCG CCGATGGCCG CAGCATCGAC CAGATCGCCG ACGTGGTCGA GATGATCAAG
CGCAACCCGG ATTCCCGGCG GCTGATCGTG ACGGCGTGGA ATCCCGCCGA GATCGACCAG
ATGGCGCTGC CGCCGTGCCA TTGCCTGTTC CAGTTCTACG TCGCGCGCGG CCGGCTGTCG
TGCCAGCTCT ATCAGCGTTC GGCCGACGTT TTCCTCGGCG TGCCGTTCAA CATCGCCTCC
TACGCGCTGC TGACCATGAT GGTGGCGCAG GTCACCGGGC TCAAGCCCGG CGAGTTCATC
CACACGCTCG GCGACGCGCA TCTTTATTCC AACCATCTCG AGCAGGCGCG GCTGCAGCTG
ACGCGGACGC CGCGCGATCT GCCGGTGATG ACGATCAATC CCCAGGTGAC GGACATCTTC
GGCTTCCGCT TCGAGGATTT CACGCTGCAC AACTACGACC CGCATCCGCA CATCAAGGCC
GAGGTGGCGG TGTAG
|
|---|
| Protein sequence | MNQYHDLLQR ILGEGAEKHD RTGTGTLSVF GHQMRFALDA GFPMLTTKRL PLKAIVHELL
WFLKGDTNIK YLKDHGVSIW DEWADENGDL GPVYGSQWRS WPAADGRSID QIADVVEMIK
RNPDSRRLIV TAWNPAEIDQ MALPPCHCLF QFYVARGRLS CQLYQRSADV FLGVPFNIAS
YALLTMMVAQ VTGLKPGEFI HTLGDAHLYS NHLEQARLQL TRTPRDLPVM TINPQVTDIF
GFRFEDFTLH NYDPHPHIKA EVAV
|
|---|
| |