| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3261 |
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| Symbol | |
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| ID | 3971773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3610256 |
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| End bp | 3611158 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637926372 |
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| Product | HflC protein |
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| Protein accession | YP_533122 |
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| Protein GI | 90424752 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.103141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.242798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGACCG GAATTGCAGG AATCGTAGCG CTGGTGGTGC TGCTTGCCGC CATCGTGGTC
GGCTACAGTT CGATCTTCAC CGTGGCCCAG ACCGAGCAGG TGCTGCTGGT TCGGCTGGGT
GAGCCGGTTC GCGTTGTCAC CGAGCCGGGG CTGAACTTCA AGGCGCCGTT CGTCGACACC
GTGATCAGCA TCGACAAGCG GATCCTCGAT CTGGAAAATC CGTCGCAGGA AGTCATCGCG
TCGGATCAGA AGCGGTTGGT GGTCGATGCC TTCGCCCGCT ATCGCATCAA GAACGCACTG
CGGTTCTACC AGAGCATCGG GTCGGTGCCG GCAGCCAACA TCCAGCTGAC CACGCTTTTG
AACGCGGCGT TGCGCCGGGT GCTGGGCGAG GTCACCTTCA TCGAGGTGGT GCGCGACCAG
CGCGAAGCCT TGATGACCAA GATCCGCGAT CAGCTCGACA GGGAAGCCGG CGGTTACGGC
ATCTCCGTGG TCGACGTCCG GATCCGGCGC GCCGATCTGC CGGAGCAGAA CAGCCAGGCG
GTGTACCAGC GGATGCAGAC CGAGCGGCAG CGCGAGGCCG CCGAGTTCCG CGCCCAGGGC
GGACAGAAGG CGCAGGAGAT CCGCTCCAAG GCCGACCGCG AAGCGACCGT GATCATCGCC
GAAGCCAACT CCACCGCCGA ACAGGTGCGC GGCGAGGGCG ACGGCGAGCG CAACCGGCTG
TTCGCCGAGG CTTATGGCAA GGACGCCGAC TTCTTCGCGT TCTATCGCTC GATGACCGCC
TATGAGAACG GCTTGAAGAG CAACGACACC CGGTTCCTGC TGCGGCCGGA TTCGGACTTC
TTCAAGTTCT TCAGCAATTC CAGCGGCAAG CCGCCGGAAA CCAGCGTCGC GGCGAAGCCG
TAA
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| Protein sequence | MKTGIAGIVA LVVLLAAIVV GYSSIFTVAQ TEQVLLVRLG EPVRVVTEPG LNFKAPFVDT
VISIDKRILD LENPSQEVIA SDQKRLVVDA FARYRIKNAL RFYQSIGSVP AANIQLTTLL
NAALRRVLGE VTFIEVVRDQ REALMTKIRD QLDREAGGYG ISVVDVRIRR ADLPEQNSQA
VYQRMQTERQ REAAEFRAQG GQKAQEIRSK ADREATVIIA EANSTAEQVR GEGDGERNRL
FAEAYGKDAD FFAFYRSMTA YENGLKSNDT RFLLRPDSDF FKFFSNSSGK PPETSVAAKP
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