Gene RPC_3250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3250 
Symbol 
ID3971916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3599665 
End bp3600036 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content59% 
IMG OID637926361 
Producttranscriptional modulator of MazE/toxin, MazF 
Protein accessionYP_533111 
Protein GI90424741 
COG category[T] Signal transduction mechanisms 
COG ID[COG2337] Growth inhibitor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.493991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.819791 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTC CTGACGTCGG TGACATTGCG TGGGTCGATT TGGACGACAC GCGCGGAAGC 
GAGCAGTCTG GCCGTCGGCC AGCGCTTGTT CTCACGCCGC TGAGCTTTCA TCAAAGGTCG
CGTCGCGCTG TGATTTGCCC GATCACATCG AAAGTCAGGG ATTGGCCGAC CAATATTGTT
CTGCCGCACG GTCTGCGAAC CAAGGGGATG ATCATGGTCG ATCAGGTGCG GTCGATTGAT
CGTGAGGAAC GCTTGTTTGA GACGATTGAG AAGGTGCCGC CGGCTATTGT CCGGGAGGTG
CGCATTAAGC TCGCCGACCT GCTCGGCATT GAGACTGATG GGCCGCCGCC CAGCGGGCTA
GATCGTGCTT AG
 
Protein sequence
MKLPDVGDIA WVDLDDTRGS EQSGRRPALV LTPLSFHQRS RRAVICPITS KVRDWPTNIV 
LPHGLRTKGM IMVDQVRSID REERLFETIE KVPPAIVREV RIKLADLLGI ETDGPPPSGL
DRA