| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3247 |
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| Symbol | |
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| ID | 3971913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3596204 |
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| End bp | 3597055 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637926358 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_533108 |
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| Protein GI | 90424738 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.430451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATCCA TCGTCATTAC CGGCGTATCC ACCGGCATCG GCCATGCCGC GGCGAAGTTG
CTGCTGGAGC GCGGCTTTGC GGTGTTCGGC AGCGTGCGCA AGCAAGAGGA TGCCGATCGG
CTCAAGGCCG AGTTCGGCGA GCATTTCACG CCGCTGATCT TCGACGTCAC CGATGAAGAC
GCGGTGAAGG CCGCGGCGCG CGAGGTCCGC ACCGCGTTGC GCGGCGAGAC GCTGGCAGGC
CTCGTCAACA ACGCCGGGAT CGCGGTGGCC GGGCCGGTGC TGGAACTGCC GATCGCGGAT
TTCCGCCATC AGTTCGAGGT CAATGTGATC GGGCCGATTC TGGCCACCCA GGCCTTCGCC
CCGCTGCTCG GCGCCGATCC GCATCTTCAG GGCCCGCGCG GCCGCATCGT GATGATCAGC
TCGTTGGCCG GCAAGTTCGG CAATCCGTTG ATGTCGGCCT ATTCGGCGTC CAAACACGCG
CTCGAAGGAT TGTCCGACGC GCTGCGCCGC GAATTGATGC TGTTCGGCAT CGACGTCATC
GTGATTGCGC CCGGCGCGGT GAAGACCCCG ATCTGGGCCA AGGCCGACGA GGTGGACATT
TCCGGCTTCG AAACCTCGCC GTTCTTTCCG GCGCTGCAGC GGGTGCGCAA CTATCTGCCG
CAGATGTCCG CCAAGGGGCT GCCGGCGGAG CGGATCGCCG AGGGCATCTT CACCGCCTTG
ACCGCGGCGC ATCCGCGGGT GCGGGTCACG CTGACCCCGG ATCCGCTGCG CAACCTGATC
ACCAACCTGC TGCCGAAGCG CACGGTCGAC AAGATCATCG GCAAGAGCCT CGGTCTGCTG
CCGGCGAAAT AG
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| Protein sequence | MRSIVITGVS TGIGHAAAKL LLERGFAVFG SVRKQEDADR LKAEFGEHFT PLIFDVTDED
AVKAAAREVR TALRGETLAG LVNNAGIAVA GPVLELPIAD FRHQFEVNVI GPILATQAFA
PLLGADPHLQ GPRGRIVMIS SLAGKFGNPL MSAYSASKHA LEGLSDALRR ELMLFGIDVI
VIAPGAVKTP IWAKADEVDI SGFETSPFFP ALQRVRNYLP QMSAKGLPAE RIAEGIFTAL
TAAHPRVRVT LTPDPLRNLI TNLLPKRTVD KIIGKSLGLL PAK
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