Gene RPC_3238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3238 
Symbol 
ID3971904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3586241 
End bp3587227 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content62% 
IMG OID637926349 
Producthypothetical protein 
Protein accessionYP_533099 
Protein GI90424729 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.556916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACA ACAAGAAGAC TCTCGCCGCC ACGTTGAAGC CCTATATCGC GCCGTTCCGG 
GCCGACGGCA CGCAGCGCTT TCACCTCAAG GCGCACAAGA CCAACGAGAA GGGCGGGCTC
GACAAGAGCC AGGCCGAGCG CATCATCGAG GCCAACCGCA AGCGGCTGAA CGATTTCCAG
GAGATGCTCT ACGCCCAGGA CCGTTGGTCG CTGCTGTTGA TCTTCCAGGG CATGGACGCC
GCCGGCAAGG ACACCGCGAT CAAGAGCGTG TTCGACGGCG TCAATCCGCA GGGCTGCGAA
GTGTACTCGT TCAAGACCCC GACAAGCCAC GAACTCGATC ACGACTTCAT GTGGCGGGCT
GCCACCAGTT TGCCGCAACG CGGCCGGATC GGAATTTTCA ACCGCTCCTA CTACGAAGAC
GTGCTGGTGG TGCGGGTGCA TCCGGAGATC CTCGCCAAGC AGAAAATCCC GCCGGAACTG
GTGACCAGGA AGGTCTGGCG CGAACGCTTC GAGGACATCG CTTCGTTCGA GCGCTATTTG
GCGCGCAACG GCACCGTGGT GCTGAAGTTC TTCCTCAACG TCTCCAAGGA AGAGCAGCGC
CAGCGTTTTC TCGGCCGGCT GGAAGATCCG GCGAAAAACT GGAAGTTCTC GATGGCCGAC
GTCTCCGAAC GCGCGCTGTG GGATCGCTAT CAGGCGGCAT ATCAGGACGC GATCGCGCAC
ACCGCAACGC CGGCGGCGCC GTGGCACATC GTGCCGGCCG ATCACAAATG GTTTGCCCGG
GTGGTGATCG GCTCGACCAT CGTGGCCGCG TTGGAGAAGC TCAACCTGCA TTTTCCCAAG
ACCGACCCGG ACTCGCTGAA GGAGTTCAAG CAGGTTCGGC TGGCGCTGGA GCAGGAGGGC
AAGAAGCGCA TCAGGTTGCG CAAGCCGGCC GGCAAAGTGG TGGAGGCCGC GGCCGCGAAA
GCCGCAAAGG CAGAGGCGAA GGTGTAG
 
Protein sequence
MPDNKKTLAA TLKPYIAPFR ADGTQRFHLK AHKTNEKGGL DKSQAERIIE ANRKRLNDFQ 
EMLYAQDRWS LLLIFQGMDA AGKDTAIKSV FDGVNPQGCE VYSFKTPTSH ELDHDFMWRA
ATSLPQRGRI GIFNRSYYED VLVVRVHPEI LAKQKIPPEL VTRKVWRERF EDIASFERYL
ARNGTVVLKF FLNVSKEEQR QRFLGRLEDP AKNWKFSMAD VSERALWDRY QAAYQDAIAH
TATPAAPWHI VPADHKWFAR VVIGSTIVAA LEKLNLHFPK TDPDSLKEFK QVRLALEQEG
KKRIRLRKPA GKVVEAAAAK AAKAEAKV