Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3238 |
Symbol | |
ID | 3971904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3586241 |
End bp | 3587227 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637926349 |
Product | hypothetical protein |
Protein accession | YP_533099 |
Protein GI | 90424729 |
COG category | [S] Function unknown |
COG ID | [COG2326] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.556916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGACA ACAAGAAGAC TCTCGCCGCC ACGTTGAAGC CCTATATCGC GCCGTTCCGG GCCGACGGCA CGCAGCGCTT TCACCTCAAG GCGCACAAGA CCAACGAGAA GGGCGGGCTC GACAAGAGCC AGGCCGAGCG CATCATCGAG GCCAACCGCA AGCGGCTGAA CGATTTCCAG GAGATGCTCT ACGCCCAGGA CCGTTGGTCG CTGCTGTTGA TCTTCCAGGG CATGGACGCC GCCGGCAAGG ACACCGCGAT CAAGAGCGTG TTCGACGGCG TCAATCCGCA GGGCTGCGAA GTGTACTCGT TCAAGACCCC GACAAGCCAC GAACTCGATC ACGACTTCAT GTGGCGGGCT GCCACCAGTT TGCCGCAACG CGGCCGGATC GGAATTTTCA ACCGCTCCTA CTACGAAGAC GTGCTGGTGG TGCGGGTGCA TCCGGAGATC CTCGCCAAGC AGAAAATCCC GCCGGAACTG GTGACCAGGA AGGTCTGGCG CGAACGCTTC GAGGACATCG CTTCGTTCGA GCGCTATTTG GCGCGCAACG GCACCGTGGT GCTGAAGTTC TTCCTCAACG TCTCCAAGGA AGAGCAGCGC CAGCGTTTTC TCGGCCGGCT GGAAGATCCG GCGAAAAACT GGAAGTTCTC GATGGCCGAC GTCTCCGAAC GCGCGCTGTG GGATCGCTAT CAGGCGGCAT ATCAGGACGC GATCGCGCAC ACCGCAACGC CGGCGGCGCC GTGGCACATC GTGCCGGCCG ATCACAAATG GTTTGCCCGG GTGGTGATCG GCTCGACCAT CGTGGCCGCG TTGGAGAAGC TCAACCTGCA TTTTCCCAAG ACCGACCCGG ACTCGCTGAA GGAGTTCAAG CAGGTTCGGC TGGCGCTGGA GCAGGAGGGC AAGAAGCGCA TCAGGTTGCG CAAGCCGGCC GGCAAAGTGG TGGAGGCCGC GGCCGCGAAA GCCGCAAAGG CAGAGGCGAA GGTGTAG
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Protein sequence | MPDNKKTLAA TLKPYIAPFR ADGTQRFHLK AHKTNEKGGL DKSQAERIIE ANRKRLNDFQ EMLYAQDRWS LLLIFQGMDA AGKDTAIKSV FDGVNPQGCE VYSFKTPTSH ELDHDFMWRA ATSLPQRGRI GIFNRSYYED VLVVRVHPEI LAKQKIPPEL VTRKVWRERF EDIASFERYL ARNGTVVLKF FLNVSKEEQR QRFLGRLEDP AKNWKFSMAD VSERALWDRY QAAYQDAIAH TATPAAPWHI VPADHKWFAR VVIGSTIVAA LEKLNLHFPK TDPDSLKEFK QVRLALEQEG KKRIRLRKPA GKVVEAAAAK AAKAEAKV
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