| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3235 |
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| Symbol | |
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| ID | 3971901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3580864 |
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| End bp | 3582429 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637926346 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_533096 |
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| Protein GI | 90424726 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.134931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCA CCACCCCGTC CGACAAGGAC CGCGTCATCA TTTTCGACAC CACCCTGCGC
GACGGCGAGC AATGCCCCGG CGCCACCATG ACCTTCGAGG AGAAGCTGGA AGTCGCCAGC
CTGCTGGACG CCATGGGCGT CGACGTCATC GAGGCCGGCT TCCCGATCGC CTCCGACGGC
GACTTCGCGG CGGTGCATGA GATCGCCAAG CGCGCCAAGA ACGCGGTGAT CTGCGGCTTG
TCCCGCGCCG GCGCCAAGGA CATTGACCGC TGCGCCGAGG CGATCCGCCC GGCCAAGCAG
GGCCGCATCC ACACCTTCCT GTCCACCTCG CCGGTGCACA TGAAGTACAA GCTGCAGATG
GACGCCGAGC AGGTCTATCA GCTGGTGATC TCGGCGGTGA CCCGTGCCCG CAACCACACC
GACAACGTCG AATGGTCATC TGAGGACGGC ACCCGCACCG AGTTCGACTT CCTGTGCAAA
TGCGTCGAGG CGGCGATCAA GGCCGGCGCC ACCACCATCA ACATTCCCGA CACCGTCGGC
TATTCGGTGC CGGAGGAATA CTTCGACCTG TTCAAGCGGG TTCGGGAAAA CGTGCCGAAT
TCCGACAAGG CGATCTTCTC GGTGCACTGC CATGACGATC TGGGCATGGC GGTGGCCAAT
TCGTTGGCCG GCATCCGCGG CGGCGCAAGG CAGATCGAAT GCACCGTCAA CGGCATCGGC
GAGCGCGCCG GCAATACCGC GCTGGAAGAA GTCGTGATGG CGATGCGGGT GCGCAACGAC
AAATTGCCGT TCTGGAACAA GATCGACACC ACGATGCTGA CCCGCGCCTC CAAGGTGGTC
TCGGCGGCGA CCTCGTTCCC GGTGCAGTAC AACAAGGCGA TCGTCGGCCG TAACGCCTTC
GCGCATGAGA GCGGCATCCA CCAGGACGGC ATGCTGAAGA ACGCCGAGAC CTACGAGATC
ATGCGGCCGG AGTCCGTCGG CGTGAAGCAA ACCTCGCTGG TGATGGGCAA GCATTCCGGC
CGTCACGCCT TCGTCCACAA GCTGGAAGAG ATGGGCTACA AGCTGGGCCA GAACCAGCTG
GAAGACGCCT TCGTGCGCTT CAAGGCGTTG GCCGACCGCA AGAAGGAAAT CTACGACGAG
GACATCGAGG CGCTGGTCGA TCAGGAAATC GCGCAGTCGC ACGATCGCAT CAAATTGCTG
TCGTTGACGG TGATCGCCGG GACCCATGGC CCGCAGCGCG CCACCATGAA GCTGGACGTC
GAGGGCCAGA CCCGGATCGA AGAAGCCGAA GGCAACGGCC CGGTCGATGC GGTGTTCAAC
TGCATCAAGG CGCTGGTGCC GCATGTCGCC AAGCTGGAGC TGTATCAGGT CCACGCCGTG
ACCCAGGGCA CCGATGCGCA GGCCGAGGTC TCGGTGCGGC TGGCGCATGA AGGCCGCTCG
ATGACCGCGC GTGCCGCCGA TCCGGATACG CTGGTGGCCT CGGCGAAGGC CTATCTCAGT
GCGTTGAACA AGATCGTGAT GAAGCGCGAG CGCGACCTGC CGGTGCCGGA AGCCGCTGCG
AGCTGA
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| Protein sequence | MTATTPSDKD RVIIFDTTLR DGEQCPGATM TFEEKLEVAS LLDAMGVDVI EAGFPIASDG
DFAAVHEIAK RAKNAVICGL SRAGAKDIDR CAEAIRPAKQ GRIHTFLSTS PVHMKYKLQM
DAEQVYQLVI SAVTRARNHT DNVEWSSEDG TRTEFDFLCK CVEAAIKAGA TTINIPDTVG
YSVPEEYFDL FKRVRENVPN SDKAIFSVHC HDDLGMAVAN SLAGIRGGAR QIECTVNGIG
ERAGNTALEE VVMAMRVRND KLPFWNKIDT TMLTRASKVV SAATSFPVQY NKAIVGRNAF
AHESGIHQDG MLKNAETYEI MRPESVGVKQ TSLVMGKHSG RHAFVHKLEE MGYKLGQNQL
EDAFVRFKAL ADRKKEIYDE DIEALVDQEI AQSHDRIKLL SLTVIAGTHG PQRATMKLDV
EGQTRIEEAE GNGPVDAVFN CIKALVPHVA KLELYQVHAV TQGTDAQAEV SVRLAHEGRS
MTARAADPDT LVASAKAYLS ALNKIVMKRE RDLPVPEAAA S
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