| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3232 |
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| Symbol | |
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| ID | 3971955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3577644 |
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| End bp | 3578969 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637926343 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_533093 |
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| Protein GI | 90424723 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.941655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCG CCATGATCTT CGTGCTGCTG ATCGCGCTGA TGCTGACCGG GATGCCGATC
TCGATCGCGC TCGGCCTCAC GGTGTTGTCC TTCATCTTCC TGATGACCAC CGTGCCGATC
GAGTCGGTGG CGCTGAAGCT GTTCACCGGC ATCGAGAATT TCGAGATCAT GGCGATCCCG
TTCTTCATTC TCGCCGGCAA TTTCCTCACC CACGGCGGCG TCGCCCGCCG CATGATCAAT
TTCGCCACCT CGATGGTCGG GCACTGGTAC GGCGGGCTCG GGCTCGCCGG GGTGATGGCG
TGCGCGCTGT TCGCCGCGGT GTCGGGCTCG TCGCCGGCCA CCGTGATCGC GATCGGCTCG
ATCATGCTGC CGGCGATGGT CAAGCAGGGC TTTCCGAAGC GGTTCGGCGC CGGCGTCATC
ACCACCTCCG GCGCGCTCGG CATCCTGATT CCGCCCTCGA TCGTGATGGT GGTCTATGCG
GTGGCGACCG GTGGCAGCGT CGCGCTGGAT CCGAACGGCA TGCGGGTGTC CTCGGCCTCG
GTCGGGCAAT TGTTCATCGC CGGCGTGATT CCCGGCATCA TGCTGGCCTC GTTGCTCGGC
CTCACCACGT TCTATCGCGC CTGGAAGAAC GACTATCCGC GGATGCCGCG CGCGAGCTGG
CTGGAGCGCT GGCAGGCGTT CCGCAAATGC GTCTGGGGCC TGTTGCTGAT CCTGATCGTG
CTCGGCGGCA TCTACGCCGG CTGGTTCACG CCGACCGAAG CCGCGGCGAT GAGCGCGGTC
TACGCCTTCG TGATCGCGGT GTTCGTCTAT CGCGACCTGC GGCTTTCGGA CGTGCCGAAG
GTGCTGCTCG GCTCCGCCAA TATGAGCGCG ATGATCCTCT ACATCATCAC CAATGCGGTG
CTGTTCTCGT TCCTGATGGC CAACGAAAAC ATCCCGCAGC AGATCGCCAA TTGGATGTCG
AGCGCCGGCA TCAATTGGGT GATCTTCCTG TTGGTGGTCA ATCTGCTGCT GTTGTTGGCC
GGCAACGTGA TGGAGGCGAC CTCGATCGTG CTGATCATGG CGCCGATCCT GTTCCCGGTG
GCGGTCAAGC TCGGCATCCA TCCGGTGCAT CTCGGCATCC TGATGGTGGT GAACATGGAG
GTCGGGATGT GTCACCCGCC GGTCGGGCTC AATCTCTACG TCGCCTCGGG TATCGCCAAG
ATGGGAATCA CCGAGCTGAC CATCGCGGTG ATGCCGTGGC TGTTGACGAT GATCGCGTTC
CTCGGTCTCG TCACCTACAT CCCGGAGCTG TCGCTGTGGC TGCCGCGCAC GCTCGGCATG
TTGTGA
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| Protein sequence | MSSAMIFVLL IALMLTGMPI SIALGLTVLS FIFLMTTVPI ESVALKLFTG IENFEIMAIP
FFILAGNFLT HGGVARRMIN FATSMVGHWY GGLGLAGVMA CALFAAVSGS SPATVIAIGS
IMLPAMVKQG FPKRFGAGVI TTSGALGILI PPSIVMVVYA VATGGSVALD PNGMRVSSAS
VGQLFIAGVI PGIMLASLLG LTTFYRAWKN DYPRMPRASW LERWQAFRKC VWGLLLILIV
LGGIYAGWFT PTEAAAMSAV YAFVIAVFVY RDLRLSDVPK VLLGSANMSA MILYIITNAV
LFSFLMANEN IPQQIANWMS SAGINWVIFL LVVNLLLLLA GNVMEATSIV LIMAPILFPV
AVKLGIHPVH LGILMVVNME VGMCHPPVGL NLYVASGIAK MGITELTIAV MPWLLTMIAF
LGLVTYIPEL SLWLPRTLGM L
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