Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3202 |
Symbol | |
ID | 3972000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3545333 |
End bp | 3546934 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637926312 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_533063 |
Protein GI | 90424693 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0351635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.132345 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGATC TTGCAGCCAC TGGCGGCGTT TCCGGGCCCG GGCGTATCGG CCGGGTGGCG ATCGGCGATC TGCTGAAGAA GGCCGCGGTG CGCTTCGCCG ATCGCGTCGC ACTGAGCGAT GGCGAGCGCC GCGTCAGCTT CGCCGAGTTG GAACGCGACG CCAACCGCTT CGCCAACTAT CTGGTGTCGC GCGGGTTGCG GCCCGGCAGC AAGATCTCGA CGATTTGCAA CAACTCGGTG GAATTCGTCA AAGCGCTGTT CGGGATTCAC CGCGCTGGCC TGGTTTGGGT GCCGATCAAC ACCATGCTGG GGCCGGCGGA TATGGACTAC ATCCTGGACC ACGCCGAGGT GAACCTCGCG CTGATCGACG ACAATCTGCA CGCCCAGCCG GAGCGCCGCG CCGCACTCGA AAAGCGCGGC ATCGATCTGG TCACGATCGA TCTCACCGGC AAGGCGAAGG CCGCCGGACT CGCCAGCTTC GGCGAGTTGA TCGAGGGGCA ATCCGACGCC GAGCCGGAGA TCGATTTCGA CGACCGCGAT CTGGCGATGA TCATCTACAC CTCCGGCACC ACTTCGCGGC CGAAGGGTGC GATGCATTGC CACCTCGCGG TGGTGATGGC GGTGATGAGC AACTGCATCG AAATGAAACT CGGCCGCGAC GACGGCATCA CCGGCCAGTT TCCGATCTTT CACTGCGCCG GCCATGTGCT GCTGTTGAGC TATCTTGCGG TCGGCGGCCG GATGGCGCTG ATGCGCGGTT TCGATCCCAT GGTCTGCATG GAGGCGATCC AGCGCGACAA GCTCACGGTG TTTGTCGGCC TGTCGCTGAT GTATCAGGCG ATTCTCGATC ATCCCCGCCG CAACGACTAC GACCTGTCGA GCCTGCGGAT GTGCATCTAC ACCATGGCGC CGATGGGGCG GCCGCTGCTG GAGCGCGGCA TCAGGGAGCT GTGTCCGAAC TTCGCGCTGA CGTCGGGACA GACCGAGATG TATCCGGCGA CCACGATGTC GCAGCCGGAC CGTCAGCTCG AGCGGTTCGG CAATTATTGG GGCGAATCGC TGATCGTCAA CGAGACCGCG ATCATGGACG AGGAGGGGCG TCTGCTGCCG CGCGGCGAGA TCGGCGAATT GGTGCATCGC GGCCCCAACG TGATGATGGG CTACTACAAG GATCCCGAGG CCACCGCCGC CGCGCGCAAG TTCGGCTGGC ATCACACCGG CGATCTGGCG CTGATCGACG CGAACGGCGA GGTGCTGTTC CTCGACCGCA AGAAAGACAT GATCAAGTCC GGCGGCGAGA ACGTCGCCTC GGTGAGGATC GAGGAGACGC TGCTGGCGCA TCCCGCGGTG CAGAACGCCG CTGTGGTCGG ATTGCCGCAT CCGCAATGGG GCGAGGCGGT GTCGGCCTTC GTGAAGTTGA AGCCGGGCGC CGCGGCCAGC GAGGCCGAGA TCGCCGAGCA TTGCAAGGCC CATCTCGGCG GCTTCCAGGT GCCGAAGCTG ATCCGGATCG TCGAGGACAT GCCGATGACC GCCACCGGCA AGCTGCGCAA GGTCGAACTG CGCAACCGGT TTGCCGACTT CTTTGCGACG GAGCGGGCGT GA
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Protein sequence | MSDLAATGGV SGPGRIGRVA IGDLLKKAAV RFADRVALSD GERRVSFAEL ERDANRFANY LVSRGLRPGS KISTICNNSV EFVKALFGIH RAGLVWVPIN TMLGPADMDY ILDHAEVNLA LIDDNLHAQP ERRAALEKRG IDLVTIDLTG KAKAAGLASF GELIEGQSDA EPEIDFDDRD LAMIIYTSGT TSRPKGAMHC HLAVVMAVMS NCIEMKLGRD DGITGQFPIF HCAGHVLLLS YLAVGGRMAL MRGFDPMVCM EAIQRDKLTV FVGLSLMYQA ILDHPRRNDY DLSSLRMCIY TMAPMGRPLL ERGIRELCPN FALTSGQTEM YPATTMSQPD RQLERFGNYW GESLIVNETA IMDEEGRLLP RGEIGELVHR GPNVMMGYYK DPEATAAARK FGWHHTGDLA LIDANGEVLF LDRKKDMIKS GGENVASVRI EETLLAHPAV QNAAVVGLPH PQWGEAVSAF VKLKPGAAAS EAEIAEHCKA HLGGFQVPKL IRIVEDMPMT ATGKLRKVEL RNRFADFFAT ERA
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