| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3191 |
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| Symbol | |
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| ID | 3972202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3531089 |
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| End bp | 3532789 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637926301 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_533052 |
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| Protein GI | 90424682 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.488817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATG GACTGCGCAA GGGCCTGACC TCTTACGGCG ACGCCGGGTT CTCGCTGTTC
CTGCGCAAGG CCTTCATCAA GGCGATGGGC TATTCCGACG ACGCGCTGGA TCGGCCGATC
GTCGGCATCA CCAACACCCA CAGCGACTAC AATCCCTGCC ACGGCAACGT GCCGCAGATC
ATCGAGGCGG TGAAGCGCGG CGTGATGCTG GCGGGCGCGA TGCCGATGGT GTTTCCAACT
ATCTCGATCG CCGAGAGTTT CGCGCATCCG ACCTCGATGT ATCTGCGCAA CCTGATGGCG
ATGGACACCG AGGAGATGAT TCGCGCCCAG CCGATGGACG CGGTGGTGGT GATCGGCGGC
TGCGACAAGA CGCTGCCGGC GCAGATCATG GCCGCGGTGT CGGCGGATCT GCCGACCGTG
GTGATTCCGG TCGGGCCGAT GGTGGTCGGC CATCACAAGG GCGAGGTGCT GGGCGCTTGC
ACCGACTGCC GCAGGTTGTG GGGCAAGTTT CGCGCCGGCG AGATGGATGA GGCCGAGATC
GAGGCGGTCA ACGGCCGGCT GGCGCCCTCG GTCGGCACCT GCATGGTGAT GGGCACCGCC
TCGACCATGG CCTGCATCAC CGAAGCGCTC GGGCTGTCGC TGCCGATGAG CGCGACGATT
CCGGCGCCGC ACGCCGAGCG ATTTCGTTCC GCCGAACAAA GCGGCAAGCT CGCCGCGGCA
ATGGCGGTGG CGAAGGGGCC GAAGCCCAGC GAGCTGTTGA CGCCGGCGGC ATTGCGCAAT
GCGCAAGTGG TGCTGCAGGC GATCGGCGGC TCCACCAACG GGCTCATTCA TCTCACCGCG
ATCGCCGGGC GAACGACGTA TCGCCTCGAT CTGGCGGCGT TCGATCGGCT GTCGCGCGAG
GTGCCGGTGC TGGTCGATCT GAAGCCGTCG GGCGATCACT ACATGGAGCA CTTCCATCAC
GCCGGCGGCG TGCCGAAACT GTTGGCGCAA CTCGGCGAGC TGATCGATCT CGACGCCAAA
ACGATTTACG GCAGCTTGCG CGATGCGGTG GCCGCGGCCG AGGACGTGCC GGGGCAGGAC
GTCATTCGCG CGCGCAACGA TCCGATCCGC AGCGAAGGCG CGATGGCGGT GCTATCCGGC
AATCTGGCGC CGCGCGGCGC GGTGATCAAG CACTCGGCGG CGTCGCCAAA GCTCCTTCAG
CACAGCGGCC GCGCCGTGGT GTTCGACAGT CTCGAGGACA TGGCGGCGCG GATCGACGAT
CCGGGTCTCG ACGTTGCGGC CGATGACGTG CTGGTGCTGC GCAATGCCGG GCCGCAGGGC
GCGCCGGGGA TGCCGGAGGC CGGCTATCTG CCGATTCCGC TGAAGCTGGC GCGCGCCGGC
GTCAAGGACA TGGTGCGGAT TTCCGACGCC CGGATGAGCG GCACCGCGTT CGGCACCATC
GTGCTGCACA TCACGCCGGA GAGCGCGGCC GGCGGGCCTT TGGCTTTGGT GCAAAACGGC
GACGTGATCC GGCTCGACGT CGAAGCGCGC CGCATCGATC TGATGGTCGA GGACGATGAG
TTAGCACGCC GCCGCCAAGC GCTGCCGGCG TCGCGGCAGC CCGCGCCGCT GCGCGGCTAT
GCGCGGTTGT TCCACCAGAC GATCCTGCAG GCCGATCAAG GCTGCGATTT CGATTTTCTG
ACCGGGCAGG GCGGGGATTA A
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| Protein sequence | MSDGLRKGLT SYGDAGFSLF LRKAFIKAMG YSDDALDRPI VGITNTHSDY NPCHGNVPQI
IEAVKRGVML AGAMPMVFPT ISIAESFAHP TSMYLRNLMA MDTEEMIRAQ PMDAVVVIGG
CDKTLPAQIM AAVSADLPTV VIPVGPMVVG HHKGEVLGAC TDCRRLWGKF RAGEMDEAEI
EAVNGRLAPS VGTCMVMGTA STMACITEAL GLSLPMSATI PAPHAERFRS AEQSGKLAAA
MAVAKGPKPS ELLTPAALRN AQVVLQAIGG STNGLIHLTA IAGRTTYRLD LAAFDRLSRE
VPVLVDLKPS GDHYMEHFHH AGGVPKLLAQ LGELIDLDAK TIYGSLRDAV AAAEDVPGQD
VIRARNDPIR SEGAMAVLSG NLAPRGAVIK HSAASPKLLQ HSGRAVVFDS LEDMAARIDD
PGLDVAADDV LVLRNAGPQG APGMPEAGYL PIPLKLARAG VKDMVRISDA RMSGTAFGTI
VLHITPESAA GGPLALVQNG DVIRLDVEAR RIDLMVEDDE LARRRQALPA SRQPAPLRGY
ARLFHQTILQ ADQGCDFDFL TGQGGD
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