| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3182 |
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| Symbol | |
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| ID | 3972193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3522858 |
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| End bp | 3525938 |
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| Gene Length | 3081 bp |
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| Protein Length | 1026 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637926292 |
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| Product | peptidase C14, caspase catalytic subunit p20 |
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| Protein accession | YP_533043 |
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| Protein GI | 90424673 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.740099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACGA TGCTGAGACT GCTAGCGATG GTGCTGGCCT GCTGGGTGGC GATCGCCTCG
CCATCCGCCG CTGCGCCGAG CGAACGGCGC ATCGCGCTGG TGATCGGCAA TGCCAATTAT
CAAGCCGGCG CGCTGCCGAC CCCGGCCAAC GACGCCGGCC TGGTCGCGCA GACCTTGCAG
GCCGCCGGCT TCGACGTCAC CGGCGCGCGC GACCTCGATC AGGAAACGCT GCGCCGCACC
TTCCGCGAGT TCCTCGACAA GGCCGCGGCG GCCGGGCCCG ACGCGGTCGC CTTCGTCTAT
CTCGGCGGTT ACGGCGTGCA GCTCGAAGGC GAGAACTATG TCGTGCCGAT CGACGCCAAG
ATCGTCCGCG ACGTCAACGT GCCGCTGGAG GCGCTGCGGC TGTCGGATTA CCTGACGCCG
CTGGCGGCGC TGAAATTGAA GGCCAGCATG GTGGTGCTCG ACCTCGCCCG CGCCAACCCG
TTTGCCAAGA CCGGCAATCC GCTGGCGAGC GGCCTGGCGC TGGTCGATCC GGAGCCGGGG
CTGATGATCG CCTTCAACGC CGCCCCCGGC ACGGTCGCCC CCGACGAGCC GGGGCCGTAT
TCGGCCTACG CCCAGGCGCT GGCCGAAATG ATGCGCGAAG CCGGGCTCAG CGTCGAGGAT
CTGTTCAGCC GGATCAGGCT GCGCGTCAAC GAGACCACCA AGGGGGCGCA GGTACCGTGG
GATGCGTCGA AGCTGCAGGC GCCGTTCAAC TTCTTCGAGC GCGCCCCGGA TGCGCCGCCG
CCGGCGGTGT CGCAGCAGCA GGCCGCCGCG GTCCGCTCGA AGCCGGTGCG GGATTTCAGC
GCCCAGGACG CCTATCTCGC CGCGGTCGAT CGCGACACGC TGAAGGATTA CGAAGCCTTT
CTCGACGCCT ATCCGCGCGA TCCGATGGCC AAGCGGGTGC GCGCCATCGT CGCCGCCCGC
CGCGAGGCGA TCACCTGGCG GCGCTCGCGT AACGTCAATA CGCCCTCGGC CTATTGGTCC
TATCTGCGGC GCTATCCGCG CGGCGCGCAT TCCGACGATG CGCGGCGAAG GCTTTCCTAT
CTCTCCGCGG AGTTCGAGCC GCCGCCGAGC TTTTCGGTGA TCACTTACGA CGTGCCGCCG
CCGCCGCCCG AGGAAGTGAT CTATATCGAG CGGCCGGTGC TGATGTTCGA CGATCCGGAT
TTCGACTTCG CCCCGCCGCC GCCACCGCCG CTGTTCTTCC TGCCGCGGCG GCCGGTGTAT
TTCGACGACC TGCCGCCGCC GCCGCCGCCG GCCTATGCGT TTATCCTGCC GATGCCGAAC
TATGCGCCGG TGCCGGTCTG GGTGCGGCCG CCGCGCGACG TCGCGCCGCC GCCCAGCAAC
GTCATCTACA ACAACATCCA CAACACCGTG GTGATCAACA ACACCACCAA CGTGGTGACG
ATCACCGATC CCGCCGGCAA GGCGCAGGTG CTGACGCCGC CGCCCGCAGC TCCGGCCGTT
GCACCGGCAC CGGATGGACG CGCCGGATCG CCGGCCGTCA GCACGAGCGG CGTGATCGCC
GCCGGCGGCG CGGCGGCCGG CGCGGCAGCG CTGCTGGCGC CGTCGCTGCC GCCGTCGGTC
GCCAGCAAGG CGGCCGTCAC CTCCAACCCG CCGCCGGCCC CGCCCGCCAA ACCGTTCTTG
CCGGGAGGAC AGCCCGCGCC GTCGCAGGCG CAAACCGGCG CACCAGGACA GACCTCGCCA
GGCGCCGCCG GCCCGCTGAC GCCCGATGGC AAGCCAGCCC CCGGCGCACC CGCGCTTCCA
GGTACCCCGA CGCCGCCCGG CGCCAAGCCA GGCACGCCCA GTGGACCGCT GCCGCCGCCG
GCTGCTGGCG CGCCGGCCAC GCCCGCCGTG ACGCCGGGCG GACCGACGCC GCCCTCCACT
CCGACTGCCA AGCCGACGTC CCAGGCGCTG CCCGGCAGCA ATGGTCAGCC GCTGCCGGCG
GTCCCCGGCG CTCCGACACC GGGCACGCCG CCCGCGGCCG GGAAACCTGG CGCACCGACG
CTTCCTGGCG CGAAGCCCGG CACGCCCGGT GCACCGCCGT CGCCGGCTGC GGGTACTCCG
CCCGGCGCAA CAACAGCACC GGCCGCCACG CCGGGTGGAC CGACGCCGCC CCCTGCTCCG
AATGCCAAGC CGGCGACCCA AGCGCTGCCC GGCAGCAATG GTCAGCCGTT GCCGGCGATC
CCGGGTGCCC CCGCGCCGGG CACGCCGCCC GCGGCCGGGA AACCGGGCGC ACCAACGCCT
CCAGGCGGAA AGCCGGGCAC GCCCGGTGCA CCGCCCTCGC CGGCTGCGGG CGCCCCGACA
ACCGCACCGG CCGCGACGCC GGGCGGACCG ACGCCGCCCC CCGCTCCGAA TGCCAAGCCG
GCATCGCAGG CGCTGCCCGG CAGCAATGGT CAGCCATTGC CGCCGGCTGC ACCGCCGTCC
CCCGCAACGC CGCCTTCCGC TGCAAAGCCG CCCGCAACGG TCGCGCCGAC GCCTCCGCCG
GCCGCGGCGC GTCCGCAGCC GGCTGCCCCG GCGCCCGTGC CGCCGCCGCC CGCCGCTGGT
CGGCCGACGC CACCCCCGGC CGCAGCGCCG CCGGCAACGC CCACGCCTCC GGCCGTGCGT
CCAGCTCCGG CCCCGCCGCC CGTGGTGCGC CCGGCTCCGC CGCCACCTCC TCCCGCTGCG
CGTCCGGCCC CGGCCGCGCC GCCTGTCGTG CGCCCGGCCC CGCCGCCGCC GCCGGTGGTG
CGTCAAGCCC CGCCGCCGCC GCCGGTGGTG CGTCAAGCCC CGCCGCCGCC GCCCGTGGTG
CGTCAGGCTC CGCCGCCGCC GCCCGTGGTG CATCAGGCTC CGCCGCCCCC GCCCGTCGTG
CGTCAGGCGC CACCACCACC ACCGCCGCCG CCGCCGCCGG TGGTGCGACC CGCTCCGCCG
CCTCCGCCGC CTCCGCCGCC GCCCGTGATG CGTCCACCGC CGCCGCCGCC GCCGCCGCCC
GCAGCGGCAC GCCCGGCGCC GCCGCCGCCG GCCGCCAAGC CGTGTACGCT GCCGAACGGC
CAGCCTTGCC CGGTGCGATG A
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| Protein sequence | MPTMLRLLAM VLACWVAIAS PSAAAPSERR IALVIGNANY QAGALPTPAN DAGLVAQTLQ
AAGFDVTGAR DLDQETLRRT FREFLDKAAA AGPDAVAFVY LGGYGVQLEG ENYVVPIDAK
IVRDVNVPLE ALRLSDYLTP LAALKLKASM VVLDLARANP FAKTGNPLAS GLALVDPEPG
LMIAFNAAPG TVAPDEPGPY SAYAQALAEM MREAGLSVED LFSRIRLRVN ETTKGAQVPW
DASKLQAPFN FFERAPDAPP PAVSQQQAAA VRSKPVRDFS AQDAYLAAVD RDTLKDYEAF
LDAYPRDPMA KRVRAIVAAR REAITWRRSR NVNTPSAYWS YLRRYPRGAH SDDARRRLSY
LSAEFEPPPS FSVITYDVPP PPPEEVIYIE RPVLMFDDPD FDFAPPPPPP LFFLPRRPVY
FDDLPPPPPP AYAFILPMPN YAPVPVWVRP PRDVAPPPSN VIYNNIHNTV VINNTTNVVT
ITDPAGKAQV LTPPPAAPAV APAPDGRAGS PAVSTSGVIA AGGAAAGAAA LLAPSLPPSV
ASKAAVTSNP PPAPPAKPFL PGGQPAPSQA QTGAPGQTSP GAAGPLTPDG KPAPGAPALP
GTPTPPGAKP GTPSGPLPPP AAGAPATPAV TPGGPTPPST PTAKPTSQAL PGSNGQPLPA
VPGAPTPGTP PAAGKPGAPT LPGAKPGTPG APPSPAAGTP PGATTAPAAT PGGPTPPPAP
NAKPATQALP GSNGQPLPAI PGAPAPGTPP AAGKPGAPTP PGGKPGTPGA PPSPAAGAPT
TAPAATPGGP TPPPAPNAKP ASQALPGSNG QPLPPAAPPS PATPPSAAKP PATVAPTPPP
AAARPQPAAP APVPPPPAAG RPTPPPAAAP PATPTPPAVR PAPAPPPVVR PAPPPPPPAA
RPAPAAPPVV RPAPPPPPVV RQAPPPPPVV RQAPPPPPVV RQAPPPPPVV HQAPPPPPVV
RQAPPPPPPP PPPVVRPAPP PPPPPPPPVM RPPPPPPPPP AAARPAPPPP AAKPCTLPNG
QPCPVR
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