Gene RPC_3180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3180 
Symbol 
ID3972191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3521470 
End bp3521757 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content58% 
IMG OID637926290 
Productexcinuclease ABC subunit C 
Protein accessionYP_533041 
Protein GI90424671 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.734981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.84005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTACT ACGTCTACCT CCTCGCCAGC AGCAAACACG GCACGCTGTA TCTCGGCGTC 
ACCAACGACC TCGTCCGCCG CTGCTACGAA CACCGCACCA AAGCCGCTCC CGGCTTCACC
TCGCGCTATG GTGTCGACAA ACTGGTCTGG TTCGAAATCT ACGATAACAT CGTCACCGCC
ATCACCCGCG AGAAGCAATT GAAGAAATGG CGCCGCGACT GGAAGATTCG GCTGATCGAG
GAGGTCAATC CGGAGTGGAG CGACCTCTAC CCCGGCATTT CACATTGA
 
Protein sequence
MAYYVYLLAS SKHGTLYLGV TNDLVRRCYE HRTKAAPGFT SRYGVDKLVW FEIYDNIVTA 
ITREKQLKKW RRDWKIRLIE EVNPEWSDLY PGISH