Gene RPC_3178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3178 
Symbol 
ID3972189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3520476 
End bp3520940 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content63% 
IMG OID637926288 
ProductMarR family transcriptional regulator 
Protein accessionYP_533039 
Protein GI90424669 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.137994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.81725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAA CGCCCTCAAG ATCCGCCCCG TCTTTGCCCG ATGTCTCGGA AATGCTTTGC 
TTTTCGATCT ATTCGGCGGA GCACGCCTTC ACCCAGCTGT ACCGCCCGCT GCTGGACCGG
CTCCAGCTCA CCTACCCGCA GTTTCTGGTG ATGGTGACGC TGTGGCGCCG CGATGGTCAG
GCGGTGAAGG AGCTGGGCAA GACGCTGTTC CTCGATTCCA GCACCCTCAC CCCGCTGCTC
AAGCGCATGG AGGCGGCTGG CCTGATCACC CGGACGCGCA ACCCGAAGGA CGAGCGCGAG
GTCCAGCTGC ATCTGACCGC GCAAGGCCGT GCGCTGCAGA GCCAGGCCGC CGACGTCATG
CAATGCATCG AGCAGGCGGT CGGGCTGGAC GGCACCACGA TCGAGGCGAT CAAAACCTCG
ATCGATGCGA TCCGGGATCG TCTTCACAAG AAGATGGGGT CTTGA
 
Protein sequence
MTATPSRSAP SLPDVSEMLC FSIYSAEHAF TQLYRPLLDR LQLTYPQFLV MVTLWRRDGQ 
AVKELGKTLF LDSSTLTPLL KRMEAAGLIT RTRNPKDERE VQLHLTAQGR ALQSQAADVM
QCIEQAVGLD GTTIEAIKTS IDAIRDRLHK KMGS