Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3178 |
Symbol | |
ID | 3972189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 3520476 |
End bp | 3520940 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637926288 |
Product | MarR family transcriptional regulator |
Protein accession | YP_533039 |
Protein GI | 90424669 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.137994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.81725 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAA CGCCCTCAAG ATCCGCCCCG TCTTTGCCCG ATGTCTCGGA AATGCTTTGC TTTTCGATCT ATTCGGCGGA GCACGCCTTC ACCCAGCTGT ACCGCCCGCT GCTGGACCGG CTCCAGCTCA CCTACCCGCA GTTTCTGGTG ATGGTGACGC TGTGGCGCCG CGATGGTCAG GCGGTGAAGG AGCTGGGCAA GACGCTGTTC CTCGATTCCA GCACCCTCAC CCCGCTGCTC AAGCGCATGG AGGCGGCTGG CCTGATCACC CGGACGCGCA ACCCGAAGGA CGAGCGCGAG GTCCAGCTGC ATCTGACCGC GCAAGGCCGT GCGCTGCAGA GCCAGGCCGC CGACGTCATG CAATGCATCG AGCAGGCGGT CGGGCTGGAC GGCACCACGA TCGAGGCGAT CAAAACCTCG ATCGATGCGA TCCGGGATCG TCTTCACAAG AAGATGGGGT CTTGA
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Protein sequence | MTATPSRSAP SLPDVSEMLC FSIYSAEHAF TQLYRPLLDR LQLTYPQFLV MVTLWRRDGQ AVKELGKTLF LDSSTLTPLL KRMEAAGLIT RTRNPKDERE VQLHLTAQGR ALQSQAADVM QCIEQAVGLD GTTIEAIKTS IDAIRDRLHK KMGS
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