Gene RPC_3176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3176 
Symbol 
ID3972612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3518710 
End bp3519477 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content68% 
IMG OID637926286 
Productalpha/beta hydrolase fold 
Protein accessionYP_533037 
Protein GI90424667 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0134002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAGC TTGCTGCCAC CGTTGCCGTT GTTGGTTCGC TTCTCGCAGG TAGTGCCGTG 
GCGCAACCGG CCAAGCCCAC CATCGTGCTG GTGCACGGCG CCTTCGCCGA CTCCTCGAGC
TGGAACGGTG TCGTCTCTAT CCTGCAGAAG ACCGGCTACA AGACCGTCGC CGCCGCCAAT
CCGCTGCGCA GCGTGTCGAG CGATGCGCGC TATGTGTCCG ACGTCGTGGC CAGCATCGAA
GGCCCGGTGG TGCTGGTCGG CCATTCCTAT GGCGGGCAGG TGATCTCGAA CGCGGCCCAA
GGCCACGCCA ACGTCAAGTC GCTGGTGTTC GTGGCGGCGT TCGCCCCGGA GGCCGGCGAG
GCCGCGGCGG AGCTGGCCGG CAAATTCCCC GGCGGCACGC TTGGCGCAGC CCTCGCGCCG
CCGGTCAAGC TCGCCTCCGG CGGCGTCGAA CTCTATATCG ATCAGTCCAA ATTCCGTGAG
CAGTTCGCCC ATGACGTGGC GGCGGCGGAC GCCGCGCTGA TGGCGGCCGG GCAACGCCCG
ATCACCGAGG CGGCGCTGAC GGAAAAATCC GGCGAGCCGG CCTGGAAATC GCTGCCGTCG
TATTTCGTCT ATGGCGACGG CGACAAGAAC ATCCCCGCCA AGGCGCTGGG CTTCATGGCC
GAACGCGCCG GCTCCAAGCG CACCGTCGTG GTCAAGGACG CCTCGCACGT CGTGATGGTG
TCGCAGCCGC AGGCGGTGGC GGAGCTGATC GAACAGGCGG CGAAGTAG
 
Protein sequence
MSKLAATVAV VGSLLAGSAV AQPAKPTIVL VHGAFADSSS WNGVVSILQK TGYKTVAAAN 
PLRSVSSDAR YVSDVVASIE GPVVLVGHSY GGQVISNAAQ GHANVKSLVF VAAFAPEAGE
AAAELAGKFP GGTLGAALAP PVKLASGGVE LYIDQSKFRE QFAHDVAAAD AALMAAGQRP
ITEAALTEKS GEPAWKSLPS YFVYGDGDKN IPAKALGFMA ERAGSKRTVV VKDASHVVMV
SQPQAVAELI EQAAK