Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3176 |
Symbol | |
ID | 3972612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3518710 |
End bp | 3519477 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637926286 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_533037 |
Protein GI | 90424667 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0134002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAGC TTGCTGCCAC CGTTGCCGTT GTTGGTTCGC TTCTCGCAGG TAGTGCCGTG GCGCAACCGG CCAAGCCCAC CATCGTGCTG GTGCACGGCG CCTTCGCCGA CTCCTCGAGC TGGAACGGTG TCGTCTCTAT CCTGCAGAAG ACCGGCTACA AGACCGTCGC CGCCGCCAAT CCGCTGCGCA GCGTGTCGAG CGATGCGCGC TATGTGTCCG ACGTCGTGGC CAGCATCGAA GGCCCGGTGG TGCTGGTCGG CCATTCCTAT GGCGGGCAGG TGATCTCGAA CGCGGCCCAA GGCCACGCCA ACGTCAAGTC GCTGGTGTTC GTGGCGGCGT TCGCCCCGGA GGCCGGCGAG GCCGCGGCGG AGCTGGCCGG CAAATTCCCC GGCGGCACGC TTGGCGCAGC CCTCGCGCCG CCGGTCAAGC TCGCCTCCGG CGGCGTCGAA CTCTATATCG ATCAGTCCAA ATTCCGTGAG CAGTTCGCCC ATGACGTGGC GGCGGCGGAC GCCGCGCTGA TGGCGGCCGG GCAACGCCCG ATCACCGAGG CGGCGCTGAC GGAAAAATCC GGCGAGCCGG CCTGGAAATC GCTGCCGTCG TATTTCGTCT ATGGCGACGG CGACAAGAAC ATCCCCGCCA AGGCGCTGGG CTTCATGGCC GAACGCGCCG GCTCCAAGCG CACCGTCGTG GTCAAGGACG CCTCGCACGT CGTGATGGTG TCGCAGCCGC AGGCGGTGGC GGAGCTGATC GAACAGGCGG CGAAGTAG
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Protein sequence | MSKLAATVAV VGSLLAGSAV AQPAKPTIVL VHGAFADSSS WNGVVSILQK TGYKTVAAAN PLRSVSSDAR YVSDVVASIE GPVVLVGHSY GGQVISNAAQ GHANVKSLVF VAAFAPEAGE AAAELAGKFP GGTLGAALAP PVKLASGGVE LYIDQSKFRE QFAHDVAAAD AALMAAGQRP ITEAALTEKS GEPAWKSLPS YFVYGDGDKN IPAKALGFMA ERAGSKRTVV VKDASHVVMV SQPQAVAELI EQAAK
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