Gene RPC_3175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3175 
Symbol 
ID3972611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3518206 
End bp3518493 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content57% 
IMG OID637926285 
Productexcinuclease ABC subunit C 
Protein accessionYP_533036 
Protein GI90424666 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00936772 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTACT ACGTCTATCT TCTCGCCAGC AGCAAACACG GCACGCTGTA TCTCGGCGTG 
ACCAACGATC TGGTGCGTCG CTGCTTTGAG CATCGCAGCA AGGCAGCGAC CGGCTTCACC
TCGCGCTACG GTATCGACAA ACTGGTCTGG TTCGAAATCT ATGACGACAT CGTCACCGCC
ATCACCCGCG AGAAGCAATT GAAGAAATGG CGCCGCGACT GGAAGATCCG GCTGATCGAG
GAGGTCAATC CAGAGTGGAC CGACCTCTAC CCCGGCATTT CGAATTGA
 
Protein sequence
MAYYVYLLAS SKHGTLYLGV TNDLVRRCFE HRSKAATGFT SRYGIDKLVW FEIYDDIVTA 
ITREKQLKKW RRDWKIRLIE EVNPEWTDLY PGISN