Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3175 |
Symbol | |
ID | 3972611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3518206 |
End bp | 3518493 |
Gene Length | 288 bp |
Protein Length | 95 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637926285 |
Product | excinuclease ABC subunit C |
Protein accession | YP_533036 |
Protein GI | 90424666 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2827] Predicted endonuclease containing a URI domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00936772 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTACT ACGTCTATCT TCTCGCCAGC AGCAAACACG GCACGCTGTA TCTCGGCGTG ACCAACGATC TGGTGCGTCG CTGCTTTGAG CATCGCAGCA AGGCAGCGAC CGGCTTCACC TCGCGCTACG GTATCGACAA ACTGGTCTGG TTCGAAATCT ATGACGACAT CGTCACCGCC ATCACCCGCG AGAAGCAATT GAAGAAATGG CGCCGCGACT GGAAGATCCG GCTGATCGAG GAGGTCAATC CAGAGTGGAC CGACCTCTAC CCCGGCATTT CGAATTGA
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Protein sequence | MAYYVYLLAS SKHGTLYLGV TNDLVRRCFE HRSKAATGFT SRYGIDKLVW FEIYDDIVTA ITREKQLKKW RRDWKIRLIE EVNPEWTDLY PGISN
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