| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3172 |
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| Symbol | groEL |
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| ID | 3972608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3514657 |
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| End bp | 3516300 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637926282 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_533033 |
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| Protein GI | 90424663 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.252237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCTA AAGAAGTCAA ATTCGGCGTC GACGCTCGCG ATCGCATGCT GCGCGGTGTC
GACATTCTCG CCAACGCGGT CAAGGTGACG CTCGGCCCGA AGGGCCGCAA CGTCGTGCTC
GACAAGTCGT TCGGCGCGCC CCGCATTACC AAGGACGGCG TCACCGTCGC CAAGGAAATC
GAGCTCGAGG ACAAGTTCGA GAACATGGGC GCCCAGATGG TGCGCGAAGT GGCCTCGAAG
TCCGCGGATC TCGCCGGCGA CGGCACCACC ACCGCGACCG TGCTGGCCGC GGCGATCGTC
CGTGAAGGCG CCAAGTCGGT TGCCGCCGGC ATGAACCCGA TGGATCTGAA GCGCGGCATC
GACCTCGCGG TGGAAGCCGT CGTCGCCGAT CTCGTCAAGA ACTCCAAGAA GGTCACCTCG
AACGAGGAGA TCGCCCAGGT CGGCACCATC TCCGCCAATG GCGACGCCGA AATCGGCAAG
TTCCTGTCGG ACGCGATGAA GAAGGTCGGC AACGAGGGCG TCATCACCGT CGAGGAAGCC
AAGTCGCTGG AAACCGAACT CGACGTCGTC GAGGGCATGC AGTTCGACCG CGGCTACATC
TCGCCCTACT TCGTCACCAA CGCCGACAAG ATGCGCGTTG AATTCGACGA CGCCTACATC
CTGATCAACG AGAAGAAGCT CTCCAACCTC AACGAGCTGC TGCCGCTGCT CGAGGCCGTG
GTGCAGACCG GCAAGCCGCT GGTGATCGTC GCTGAAGACG TCGAGGGCGA AGCCCTCGCC
ACCCTCGTCG TCAACCGCCT GCGCGGTGGT CTGAAGGTTG CCGCCGTCAA GGCGCCGGGC
TTCGGCGATC GCCGCAAGGC GATGCTGCAG GACATCGCGA TCCTGACCGG CGGCCAGGCG
ATCTCGGAAG ATCTCGGCAT CAAGATGGAG AACGTCACCC TGGCCATGCT CGGCAAGGCC
AAGAAGGTGA TGATCGACAA GGAAAACACC ACCATCGTCA ACGGCGCCGG CAAAAAGGCC
GACATCGAAG CCCGCGTCGC CCAGATCAAG GCGCAGATCG AAGAGACCAC GTCGGACTAC
GACCGTGAGA AGCTGCAGGA GCGTCTCGCC AAGCTCGCCG GTGGCGTTGC GGTGATCCGC
GTCGGTGGTG CCACCGAGAT CGAAGTCAAG GAGCGCAAGG ACCGCGTCGA CGACGCGATG
CATGCGACCC GTGCGGCGGT CGAGGAAGGC ATTCTACCGG GCGGCGGCGT CGCTTTGCTG
CGTGCTTCCG AGCAGCTGAA GCGCATCAAG ACCCAGAACG ACGACCAGAA GACCGGCGTC
GAAATCGTCC GCAAGGCTTT GTCCTGGCCG GCTCGCCAGA TCGCCATCAA CGCCGGCGAA
GACGGCTCGG TGATCGTCGG CAAGATCCTC GAGAAGGATC AGTATTCGTA CGGCTTCGAC
TCGCAGTCCG GCGAATATGG CGACATGGTC AAGAAGGGCA TCATCGACCC CACCAAGGTG
GTGCGTGCGG CGATCCAGAA CGCGGCCTCG GTCGCGGCGC TCTTGATCAC CACCGAAGCG
ATGATCGCTG AGCTGCCGAA GAAGGGCAAC GCCGGCGGCG GTATGCCCCC CGGTGGCGGC
GGCATGGGCG GCATGGATTT CTGA
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| Protein sequence | MSAKEVKFGV DARDRMLRGV DILANAVKVT LGPKGRNVVL DKSFGAPRIT KDGVTVAKEI
ELEDKFENMG AQMVREVASK SADLAGDGTT TATVLAAAIV REGAKSVAAG MNPMDLKRGI
DLAVEAVVAD LVKNSKKVTS NEEIAQVGTI SANGDAEIGK FLSDAMKKVG NEGVITVEEA
KSLETELDVV EGMQFDRGYI SPYFVTNADK MRVEFDDAYI LINEKKLSNL NELLPLLEAV
VQTGKPLVIV AEDVEGEALA TLVVNRLRGG LKVAAVKAPG FGDRRKAMLQ DIAILTGGQA
ISEDLGIKME NVTLAMLGKA KKVMIDKENT TIVNGAGKKA DIEARVAQIK AQIEETTSDY
DREKLQERLA KLAGGVAVIR VGGATEIEVK ERKDRVDDAM HATRAAVEEG ILPGGGVALL
RASEQLKRIK TQNDDQKTGV EIVRKALSWP ARQIAINAGE DGSVIVGKIL EKDQYSYGFD
SQSGEYGDMV KKGIIDPTKV VRAAIQNAAS VAALLITTEA MIAELPKKGN AGGGMPPGGG
GMGGMDF
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