Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3168 |
Symbol | |
ID | 3972604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3512609 |
End bp | 3513283 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637926278 |
Product | hypothetical protein |
Protein accession | YP_533029 |
Protein GI | 90424659 |
COG category | [S] Function unknown |
COG ID | [COG4185] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.335635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.446109 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTTGCTG GGCCAAATGG TTCCGGCAAG AGCACGCTGA CCGACTATCT GATGGAAGCC GGAATCGAGT TTGGCGAGTA CATCAACGCG GACCAGATCG CATCGATGCT CGATATGCCA GAACCGCAGC GTTCGCGGCA GGCGCAGGCG ATCGCGGATT TCCAGCGTGA GCGGTGCCTG AGCAATGGCT TGAGCTTCAG TTTCGAAACC GTGATGTCGC ATCCGAGCAA GGTGGATCTC ATGATCCGCG CTGATGATGC CGGCTACGAG GTGACATTGT ACTTCGTCTG TACCTCCGAT CCGGACATCA ACATCACCCG CGTGGAGAAT CGCGTCAGCA GCGGCGGGCA CGATGTTCCG CGGGAGCGGG TTGCGGCACG ATATCATCGC ACGCTCGGGC TGTTATCGCA CGCGGCGCTG GTCGCCGGTC GGACCGTGCT GTTCGACAAC AGCGCGATCG TCGGATTGCA GTCGAACGCG CTGCTTCCGC ATCCCAAAAC TGGTCTGCGG CCGGTGGGGG AAATGATCCG CGACGGCAAT AACTACGAGA TCACGCTGGA GGCGGACGTC CCGGTCTGGG TATGGGAGCA TCTGGTGGCG CCGTTGGAAC TACTTGCGCG GCAGTCGGAT GGCGCAATTG GATTGACGAT CAACCAGAAG TCGGGGTGCT TTTGA
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Protein sequence | MVAGPNGSGK STLTDYLMEA GIEFGEYINA DQIASMLDMP EPQRSRQAQA IADFQRERCL SNGLSFSFET VMSHPSKVDL MIRADDAGYE VTLYFVCTSD PDINITRVEN RVSSGGHDVP RERVAARYHR TLGLLSHAAL VAGRTVLFDN SAIVGLQSNA LLPHPKTGLR PVGEMIRDGN NYEITLEADV PVWVWEHLVA PLELLARQSD GAIGLTINQK SGCF
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