Gene RPC_3147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3147 
Symbol 
ID3972680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3491077 
End bp3492243 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content69% 
IMG OID637926256 
Producthypothetical protein 
Protein accessionYP_533008 
Protein GI90424638 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.114905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGGT TGCAGAGCGG ATCGGCCCTG GCAGGAACTG CGATTTGCGT CGCAGCGTTG 
CTGGTGGCTT GGCCGTCCGC ACAGCACGCC GGAGCCCTGC TGGATGCCCA AGACGATCCG
GCGCAACTGG CCGACGTGCA AATTAGTTCG GCATTGCGGC AGGCCCCAAG CCTGATCGAA
CAGAACATCG AGAGCGCATT GGCGCAAAAC GACTCCGATC TTGCCCAAAG TCTGGTCGCG
CTTGCCGCCG ACAAAGGAAT CACCGTTCCC GAGGCGCTGC AGCAGCGCGT CGCCGACGCG
GTGCAGCTCG ACCACAGTCC TGCCCAGGTC GCCAAGCGCT TTGCAACCGG GCTAGTCACC
GGCAATGTCG AGGACGGGGC CAGTCTGTCG GGCAGCGTCG CCGGCGATCT GTTTGTGTTC
GGCGACGTCC GCGACGTGGT GCGCGAAAGT CAAAAGCTGG CCGCCGGCGA GGAGCCCGAC
CGGGTGATTC TCGGACTCGC CGCCGCCGGA CTCGCGGTGA CCGCGGCGAC GTTTGTTTCG
GTGGGCGGCA CCACGCCGGT GCGCGCCGGG CTGACGCTGG TCAAGGACGC CCGCAAGGTC
GGGCGATTGG GCGCCGGACT GTCGCGATGG GCCGGACGAT CGGCCGCCGA GGTGGTCGAT
ACGCCGGCGT TGCGCAACGC GCTGTCGGCC GGTGCGCTGA GCAAGCCCGC GGAGACCGTC
ACCGCGGTGA GAGCGGCGTT TCGCGCCGAC AAGGCCGGCG CGTTGGTGCG GGTCGCCAAG
GACGTCGGAC GGATCGGCGA AAAGCTCGGC ACCCGCGGCG CGCTCGACAC GCTGAAGATC
GCCGAAGGGC CGAAGGACAT CGCGCGGGCC GCACGCTTGG CGGAGTCGAA GGCCGGCCAG
ACCCGCGGCA TTCTCAAGCT CCTTGGTCGC GGCGCGCTGT TCTTGACGAT CGGCGCCTTC
AACCTGTCGT GGTGGATGCT CTGGGCCGTG TTCGCATTCT TCGGCGTGCT GAGTTCGATC
AAGGCCGCGA CCGAACGCAC GACACGGTGG TGGCTGCGCC GCCGCCGGGA AAAAACCGCG
GCTCGGCAAA CCGCGTTGCG CGCCGCCGCG GCAACTATCC CGCCACTGCC GCCGTTGCCG
CTGGCGGCGT TGCGCGCCCC GCGTTAG
 
Protein sequence
MTRLQSGSAL AGTAICVAAL LVAWPSAQHA GALLDAQDDP AQLADVQISS ALRQAPSLIE 
QNIESALAQN DSDLAQSLVA LAADKGITVP EALQQRVADA VQLDHSPAQV AKRFATGLVT
GNVEDGASLS GSVAGDLFVF GDVRDVVRES QKLAAGEEPD RVILGLAAAG LAVTAATFVS
VGGTTPVRAG LTLVKDARKV GRLGAGLSRW AGRSAAEVVD TPALRNALSA GALSKPAETV
TAVRAAFRAD KAGALVRVAK DVGRIGEKLG TRGALDTLKI AEGPKDIARA ARLAESKAGQ
TRGILKLLGR GALFLTIGAF NLSWWMLWAV FAFFGVLSSI KAATERTTRW WLRRRREKTA
ARQTALRAAA ATIPPLPPLP LAALRAPR