Gene RPC_3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3140 
Symbol 
ID3972673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3485588 
End bp3486118 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content68% 
IMG OID637926249 
Producthypothetical protein 
Protein accessionYP_533001 
Protein GI90424631 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.735648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCT ATCAACTCGA CGGGCAGGGC CCGGAACTGG CCGCCGACGC CAGCCATTTC 
ATCGCCGACA GCGCGGCGGT GATCGGCAAG GTCCGCTTGG GGGCCTCGGT CAGCATATGG
TTCGGCGCGG TGCTGCGCGG CGACAACGAG TGGATCGAGA TCGGCGCCGG CTCCAATGTC
CAGGACAACG CCACCTGCCA CACCGATCCC GGCTTTCCGC TGAGCGTCGG GCGCAACTGC
ACCATCGGCC ACAATGTGAT TCTGCACGGC TGCACGGTGG AGGACGACGT CTTGATCGGC
ATGGGGGCGA TCGTGATGAA CGGCGCCCGC ATCGCGCGCG GCTGCGTCGT CGGCGCCGGC
GCGGTGATCA CCGAGGGCAA GCAGTTTCCG GAGCGCTCGC TGATCATCGG CTCGCCGGCG
AAAGTGATCC GCACGCTGGA GCCGGCGCAG GTCGCCGCGA TGACCGCGGG GGCCGGTTTC
TATGTGCGCA ACGGCGCGCG CTACAACGCC GGCCTGACCC GAATCGGCTG A
 
Protein sequence
MAIYQLDGQG PELAADASHF IADSAAVIGK VRLGASVSIW FGAVLRGDNE WIEIGAGSNV 
QDNATCHTDP GFPLSVGRNC TIGHNVILHG CTVEDDVLIG MGAIVMNGAR IARGCVVGAG
AVITEGKQFP ERSLIIGSPA KVIRTLEPAQ VAAMTAGAGF YVRNGARYNA GLTRIG