Gene RPC_3130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3130 
Symbol 
ID3972779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3475995 
End bp3476549 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content69% 
IMG OID637926239 
Producthypothetical protein 
Protein accessionYP_532991 
Protein GI90424621 
COG category[S] Function unknown 
COG ID[COG5388] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0916882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCATC CAGCAAGCCA GGCGCTGTTC GCCTATTGGG ACGACAAGCG GGGCGGCGCG 
CGGGCTCCGG AGCGTCAGGC CTTCGAGCCG GCCGAGATCA GAGAATTGCT CGGCGACATC
TTCGTCCTGT CGTACCAGCG CGCCGTCGAG TGCCGATTCC GGGTCGCCGG GACCCGGGTC
TGCGCCCTGC TCGGCCGCGA CCTCAAAGGC GAGAGCTTCG CCGCACTGTT TGCCGCCGAA
AGCCGCGGCG AGATCGAAGA CCTGCTGGGT TTGGTCGCCG AAGACGCGCT GACGGCCGTC
GCCGGCCTCA GCGCCGCGAC CTCCGACGGC TCGGTCAGCC ATCTCGAATT GTTGCTGCTG
CCGTTCAACG CCCGCGCCCA CAGCCCGCTG ACCATGACCG GGCTGTTGGC CCCGCTCGAT
CTCGGCCACC GCAACCTCGG CGAATTCCGC CTGACCTCCT GGCGCACGCT GCGCCCGCCG
CAACGACTCG GCCGGCGCTC GCTGCGCAAG TTCCGGGCGG CGCCCGGCTT GACAGTTTAC
GAGGGGGTCA ACTGA
 
Protein sequence
MKHPASQALF AYWDDKRGGA RAPERQAFEP AEIRELLGDI FVLSYQRAVE CRFRVAGTRV 
CALLGRDLKG ESFAALFAAE SRGEIEDLLG LVAEDALTAV AGLSAATSDG SVSHLELLLL
PFNARAHSPL TMTGLLAPLD LGHRNLGEFR LTSWRTLRPP QRLGRRSLRK FRAAPGLTVY
EGVN