| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3129 |
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| Symbol | |
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| ID | 3972778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3474721 |
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| End bp | 3475551 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637926238 |
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| Product | rhomboid-like protein |
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| Protein accession | YP_532990 |
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| Protein GI | 90424620 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0489424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGTCGA ATCCGAAACA CGCCGCGGGA TGCACGGCGA AGGTCGGACC GGGACACAGC
CCTGAAGGCC TGACCTTGCA AGCCGTCGAT CCTCCGCGCG AACCGATCCT GACCCTGCCG
GGCGCCTTGA CCGCCTATGT CGCCTTGCTG GCGGTGATCC ATCTGCGCGT GCTGCTGCCG
CCGGATCTGG AATACTGGAC CATCGAGATG TTCGGCTTCA TCCCGATGCG CTACGATTCG
ACGCTGCTGG CGACGCCGTT TCCCGGCGGC ACCGCGGCCA AGATCTGGTC GTTCGTCACC
TATTCGCTGC TGCACGCCAA TCTCAGCCAC ATCCTTTTCA ACGTGCTGTG GCTGCTGCCG
TTCGGCAGCG CGCTGGCGCG CCGGTTCGGC GCGGTGCGGT TCTTCGTGTT CATGGCGGTG
ACCGCGATCG CCGGCGCTTT GGCGCATCTC GTCACCCACG AGCACGCGAT GGCGCCGATG
ATCGGCGCCT CGGCGTCGGT TTCGGGAGCG ATGGCCGCGG CGATCCGCTT CGCCTTCGTG
CAGGGCAGCT TCCTGTCGTT CCGGCGCGGC GACGCCGAAA CTGCGGCTCT GGTGCCGGCG
CAGCCCTTGA GCCGGGCGCT GCGCGATCCG CGGGTGCTGG GATTCCTGGC GATCTGGTTC
GGCATCAATA TCGTGTTCGG AGTGGGATCG ATCGCAATCG GCGCCGAGGG CGCCAGCGTC
GCCTGGCAGG CGCATATCGG CGGGTTCTTC GCCGGGCTGT TGCTGTTTGC GCTGTTCGAT
CCGGTGCCGC GGGCGCGGCC CGGCGCCGAC GGGGCGTTTC CCGAGAGTTG A
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| Protein sequence | MPSNPKHAAG CTAKVGPGHS PEGLTLQAVD PPREPILTLP GALTAYVALL AVIHLRVLLP
PDLEYWTIEM FGFIPMRYDS TLLATPFPGG TAAKIWSFVT YSLLHANLSH ILFNVLWLLP
FGSALARRFG AVRFFVFMAV TAIAGALAHL VTHEHAMAPM IGASASVSGA MAAAIRFAFV
QGSFLSFRRG DAETAALVPA QPLSRALRDP RVLGFLAIWF GINIVFGVGS IAIGAEGASV
AWQAHIGGFF AGLLLFALFD PVPRARPGAD GAFPES
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