| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3127 |
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| Symbol | |
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| ID | 3972776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3472851 |
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| End bp | 3473885 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637926236 |
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| Product | patatin |
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| Protein accession | YP_532988 |
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| Protein GI | 90424618 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.238367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGGAAA ACCTGATCGG ACGCGGCCAG CAAGCGTCCG TCGGCCGTGA CAAGGTCGGC
CTCGGCAGTA TCAGACGACC GGTGATCGGA TTGGCGCTCG GCGGCGGCGC GGCGCGCGGC
TTCGCCCATA TCGGCATCCT GCGCACCCTG CTCGCCAACG GCATCGTCCC GGACGTCGTG
GTCGGCACCT CGATCGGCGC CGTGGTCGGC GCGGCCTATG CCGCCGGCCA TCTCGACAGC
CTGGAGGACT GGGCGCGCAG CCTGCAGCCG CGCAATATCT TCGGCTATCT CGACATCCGG
CTGAACGGCT CCGGGCTGAT CGGCGGCGAC AAGCTCGCGG CGCAGCTCGA GGCCACGCTC
GGCCAGATCC AGATCAGCGA CCTCATCATC AAATTCGCCA GCGTCGCCAC CGAGGTGCGC
ACCGGCCACG AAATCTGGCT GACCCAGGGC CGCATCGTCG ACGCGGTCCG CGCCTCCTAT
GCGCTGCCGG GGATCTTCGC GCCGGTGCTG ATCGGCGACC GCTGGCTGGT CGACGGCGCC
CTGGTCAATC CGGTGCCAGT GTCGGCCGCG CGGGCGCTGG GGGCTGAGAT CGTGATCGCC
GCCAATGTCT CGAGCGACGT GTTCGGCCAC GGCACCACGA TCTTCTCACA CGGCACCCCG
ATCGAGGAGA TCGAGACGGT GATCGAAAGC CCGGCGCCGC GGCGCGGCTT CGGCCGGTTC
TTCTCGGCCG AGCGCTTCAT GAAGCGCGAA TTGTTCGGCA CCAGCGATCG GCCCGGCATC
TCCACCGTGA TGGTCGACGC CTTCAACATC ATGCAGGATC GGATTACCCG CGCCCGGCTG
GCCGGCGACC CGCCCGACCT GCTGATCTCG CCGCGGGTCG GCAAGATCGG CTGGTTCGAC
TTCCACCGCG CCGACGAGAT GATCGGCCAC GGCGCGAGAG CCGCCGAGCG CGCCATCGAG
TCGATTCAGG AGGCGATCGA GATCATCGCC CCCGAAACGC CGGCGGAATC GCTGGCCAAT
ACCGAGAAGG CGTAA
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| Protein sequence | MLENLIGRGQ QASVGRDKVG LGSIRRPVIG LALGGGAARG FAHIGILRTL LANGIVPDVV
VGTSIGAVVG AAYAAGHLDS LEDWARSLQP RNIFGYLDIR LNGSGLIGGD KLAAQLEATL
GQIQISDLII KFASVATEVR TGHEIWLTQG RIVDAVRASY ALPGIFAPVL IGDRWLVDGA
LVNPVPVSAA RALGAEIVIA ANVSSDVFGH GTTIFSHGTP IEEIETVIES PAPRRGFGRF
FSAERFMKRE LFGTSDRPGI STVMVDAFNI MQDRITRARL AGDPPDLLIS PRVGKIGWFD
FHRADEMIGH GARAAERAIE SIQEAIEIIA PETPAESLAN TEKA
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