Gene RPC_3123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3123 
Symbol 
ID3972772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3466642 
End bp3467205 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content71% 
IMG OID637926232 
Productnitroreductase 
Protein accessionYP_532984 
Protein GI90424614 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG TCGTCGAATT CCTGAAGAGC CGCCGCTCGG TGAAGCCGCG CGATATGACC 
GAGCCTGCGC CCTCGCCGGC CGACCTCGAC ACCATCCTGA CGATCGCCGC CCGGGTGCCG
GATCACGGCA AGCTGGCGCC GTGGCGCTTC ATCGTGTTCG AGGGCGACGC CCGCGCCCGC
GCCGGCGCGA TCATCGCCGA GGTGTTTGCG CAGAAGCATC CCGACGCGGC TGCGGCCGAT
GTCGAGGCCG AACGCGGCGC GCTGCTGCAG GCGCCGCTGG TGGTCGCCGT GGTCAGTTCG
CCGAAGCCGC ACGACCGCGT GCCGGCCTGG GAGCAGCAAT TGTCGGCCGG CGCCAGCGCG
CTCAACCTCG TCACCGCCGC CACCGCGCTC GGCTATGGCG CGAACTGGCT GACCGGATGG
TTCGCCTACG ACCGCGACGT GATGGACCGC CTCGGGCTCA AGCCCGAGGA GAAGCTCGCC
GGCTTCATCC ACATCGGAAC GCCGCAGCGC CACAGCAGCG AACGTCCCCG CCCGGCGCTG
GCCGAGATCG TCACGCGGTT CTAG
 
Protein sequence
MTDVVEFLKS RRSVKPRDMT EPAPSPADLD TILTIAARVP DHGKLAPWRF IVFEGDARAR 
AGAIIAEVFA QKHPDAAAAD VEAERGALLQ APLVVAVVSS PKPHDRVPAW EQQLSAGASA
LNLVTAATAL GYGANWLTGW FAYDRDVMDR LGLKPEEKLA GFIHIGTPQR HSSERPRPAL
AEIVTRF