| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3121 |
|---|
| Symbol | thrS |
|---|
| ID | 3972770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 3464156 |
|---|
| End bp | 3466195 |
|---|
| Gene Length | 2040 bp |
|---|
| Protein Length | 679 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637926230 |
|---|
| Product | threonyl-tRNA synthetase |
|---|
| Protein accession | YP_532982 |
|---|
| Protein GI | 90424612 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0441] Threonyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACA AGTCCGCGCC CGCCCAGGGA TTCCAATACA GCCTCAGCAA TCTGAAGCCG
GCCTCGGCGA CCCACGCCGT CGTCACCTTC CCGGACGGCA AGAGCCGCGA ATACCCCCGC
GGTACCACCG GCCTCGACAT CGCCAAGAGC ATTGCCCCGT CGCTGGCCAA ACGCACCGTG
GCGATGGCGG TCGACGGCGT GCTGACCGAT CTGGCCGATC CGATCGCGCA CGACGTCAAG
ATCGATTTCA TTGCCCGCGA CGACGCCCGC GCGCTGGAAT TGATCCGCCA CGATTGCGCC
CACGTGCTCG CCGAAGCGGT GCAGACGCTG TGGCCCGGCA CCCAGGTGAC GATCGGCCCG
ACCATCGAGA ACGGCTTCTA CTACGACTTC TTCCGCAACG AGCCGTTCAC GCCGGAAGAC
TTCGCCGCGA TCGAAAAGAA AATGCGCGAG ATCATCGGCC GCGACAAGCC GTTCACCAAG
GACGTCTGGG ACCGCGAAAA GACCAAGCAG GTGTTCCGCG ACAAGGGCGA GACTTTCAAG
GTCGAGCTGG TCGACGCCAT TCCCGGCAAC GATCTGATCA AGATCTACTA CCAGGGCGAC
TGGTTCGATC TGTGCCGCGG CCCGCACATG ACATCGACCG GCAAAATCGG CACCGCCTTC
AAGCTGATGA AGGTGGCCGG CGCGTATTGG CGCGGTGACA GCAACAACCC GATGCTGACC
CGGATCTACG GCACCGCGTT TGCCAAGCAG GAAGAGCTCG ACGCCTACCT CAAGCAGATC
GAGGAAGCCG AGAAGCGCGA CCACCGCAAG CTCGGCCGCG AACTCGATCT GTTCCATTTC
CAGGAGGAAG GTCCCGGCGT GGTGTTCTGG CACGCCAAGG GCTGGACCAT CTTCCAGGCC
CTGATCGCCT ATATGCGCCG CAGGCTGAGC GGCGACTATG ACGAGGTCAA CGCGCCGCAG
ATTCTCGACA AGGCGCTGTG GGAGATCTCC GGGCACTGGG AATGGTACCG CGAGAACATG
TTCGCGGCGC AGTCCGCCGG CGACGAAGCC GAGGACAAGC GCTGGTTCGC GCTGAAGCCG
ATGAACTGCC CCGGCCATGT GCAGATCTTC AAGCACGGGC TGAAGAGCTA TCGCGACCTG
CCGCTGCGGA TGGCCGAATT CGGCATCGTG CATCGCTACG AGCCGTCCGG CGCGATGCAC
GGCTTGATGC GGGTGCGCGG CTTCACCCAA GACGACGCTC ACGTGTTCTG CACCGAGGCG
CAGCTCGCCG AGGAGTGTCT CAAGATCAAC GAGCTGATCC TGTCGACCTA TTCGGATTTC
GGCTTCGGCG ACATCGTGGT GAAACTCTCG ACCCGGCCGG AGAAACGCGT CGGCACCGAC
GAGATGTGGG ATCACGCCGA ACGGGTGATG GCCACCGTGC TCGCCGAGAT CGAGGCGGCC
TCCGGCGGCC GCATCAAGAC GTCCATCAAC CCGGGCGAAG GCGCGTTCTA CGGGCCGAAG
TTCGAATACG TGCTGCGCGA CGCGATCGGC CGCGACTGGC AATGCGGCAC CACCCAGGTC
GACTTCAACC TGCCGGAACG TTTCGGGGCG TTCTACATCG ACGCCGACGG CTCGAAGAAG
GCGCCGGTGA TGGTGCATCG CGCGATCTGC GGCTCGATGG AGCGCTTCAT CGGCATCCTG
ATCGAGCATT TCGCCGGCAG CTTCCCGCTG TGGCTGGCGC CGGTGCAGGT CGTCGTCACC
ACCATCACCT CGGAAGGCGA TGACTACGCC AAGGTGGTCG CCGCGGCGGC GCGGCGTGCC
GGGTTGCGGG TCGAGCTCGA TCTGCGCAAC GAGAAGATCA ACTACAAGGT CCGCGAGCAT
TCGCTGGCCA AGATCCCGGC GATGCTGGTG GTCGGCAAGA AGGAAGCCGA GAGCCATCAG
GTCTCGGTGC GCCGGCTCGG CAGCGAAGGC CAGACCGTGC TGCCGACCAA TGAGGCGATC
GCCGCCTTGG TCGAAGAAGC GGTGCCGCCG GACGTCAAGC GGGCGCGGGC CGAGAGCTAA
|
|---|
| Protein sequence | MPDKSAPAQG FQYSLSNLKP ASATHAVVTF PDGKSREYPR GTTGLDIAKS IAPSLAKRTV
AMAVDGVLTD LADPIAHDVK IDFIARDDAR ALELIRHDCA HVLAEAVQTL WPGTQVTIGP
TIENGFYYDF FRNEPFTPED FAAIEKKMRE IIGRDKPFTK DVWDREKTKQ VFRDKGETFK
VELVDAIPGN DLIKIYYQGD WFDLCRGPHM TSTGKIGTAF KLMKVAGAYW RGDSNNPMLT
RIYGTAFAKQ EELDAYLKQI EEAEKRDHRK LGRELDLFHF QEEGPGVVFW HAKGWTIFQA
LIAYMRRRLS GDYDEVNAPQ ILDKALWEIS GHWEWYRENM FAAQSAGDEA EDKRWFALKP
MNCPGHVQIF KHGLKSYRDL PLRMAEFGIV HRYEPSGAMH GLMRVRGFTQ DDAHVFCTEA
QLAEECLKIN ELILSTYSDF GFGDIVVKLS TRPEKRVGTD EMWDHAERVM ATVLAEIEAA
SGGRIKTSIN PGEGAFYGPK FEYVLRDAIG RDWQCGTTQV DFNLPERFGA FYIDADGSKK
APVMVHRAIC GSMERFIGIL IEHFAGSFPL WLAPVQVVVT TITSEGDDYA KVVAAAARRA
GLRVELDLRN EKINYKVREH SLAKIPAMLV VGKKEAESHQ VSVRRLGSEG QTVLPTNEAI
AALVEEAVPP DVKRARAES
|
|---|
| |