Gene RPC_3113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3113 
SymbolhisI 
ID3972969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3455520 
End bp3455963 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content69% 
IMG OID637926222 
Productphosphoribosyl-AMP cyclohydrolase 
Protein accessionYP_532974 
Protein GI90424604 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.490973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCAC CAACCACGCC TGCCGCCGCT CTCGACGACG TCGAGGAAGG CGTCGTGCTG 
CGTCCGAAAT TCGATGCCGC CGGGCTCGTC ACCTGCGTCA CCACCGACGC GCAGAGCGGC
GACGTGCTGA TGGTCGCGTT CATGAACGAC GAGGCGCTGA AGAAGACCAT CGACAGCGGC
GAGGCCTGGT ATTTCAGCCG CTCGCGCGGC CGGCTGTGGC GCAAGGGCGA AAGCTCCGGC
CACGTCCAGC GCGTGCTGGA GATCCGGGTC GACTGCGACC AGGACGCGGT GTGGATCAAG
GTGGAGCAGG GCGGCGGCGC GGCCTGCCAC ACCGGCCGCA AGTCCTGCTT CTATCGCCGC
GTCGACCGCG ACGCCGAAGG CGCGCCGCTG TTGTCGCCGG TCGACGCCGA GCGGCTGTTC
GATCCGGCCA AGGTGTATCG CTGA
 
Protein sequence
MSAPTTPAAA LDDVEEGVVL RPKFDAAGLV TCVTTDAQSG DVLMVAFMND EALKKTIDSG 
EAWYFSRSRG RLWRKGESSG HVQRVLEIRV DCDQDAVWIK VEQGGGAACH TGRKSCFYRR
VDRDAEGAPL LSPVDAERLF DPAKVYR