Gene RPC_3108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3108 
Symbol 
ID3972964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3450511 
End bp3451059 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content64% 
IMG OID637926217 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_532969 
Protein GI90424599 
COG category[T] Signal transduction mechanisms 
COG ID[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.224372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.488817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGGA TCGATTTCAA CAAGCTGCGC TTTCTGGTCT GCGACGACAA TCCGCACATG 
CGGCGCATCC TGCGCACGTT GCTGCATTCG TTCGGCGCCC GCGAGGTCTA CGAGGCCGAG
GACGGCGCCA CTGCGCTCGA GATGTACAGC CACTACGCCC CCGACATCGT CATCACCGAC
TGGGCGATGC CGATCTTCGA CGGCCTCGAA CTGACCCAGA TGATCCGGCA GCCGGAGGCC
AAGGGCAATC CGTTCGCGCC GATCATCATG CTGACCGGGC ATTCCGAGAA GCGCCGCGTC
ACCGTGGCGC GCGATGCCGG CGTCACCGAG TTTCTCGCCA AGCCGATCTC CGCCAAGGCG
CTGTATCAGC GCGTGCTCAA CGTCGTCGCC AATCCGCGGC CGTTCATCAA GACCAAGAAT
TATTTCGGCC CGGACCGCCG CCGCAACAGC GCCGCCAACG CCTATATCGG GCCGGAACGC
CGCAACGGCG GCGATGCCGA ACTGATCCAT CAACCGTCGT TGCTCGATAA GGCCCGCGTC
GCGGGATAG
 
Protein sequence
MFRIDFNKLR FLVCDDNPHM RRILRTLLHS FGAREVYEAE DGATALEMYS HYAPDIVITD 
WAMPIFDGLE LTQMIRQPEA KGNPFAPIIM LTGHSEKRRV TVARDAGVTE FLAKPISAKA
LYQRVLNVVA NPRPFIKTKN YFGPDRRRNS AANAYIGPER RNGGDAELIH QPSLLDKARV
AG