Gene RPC_3107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3107 
Symbol 
ID3972963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3449224 
End bp3450030 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content50% 
IMG OID637926216 
Producthypothetical protein 
Protein accessionYP_532968 
Protein GI90424598 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.452049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.3359 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTTC TGAACAAGGA AGAAGAAGTC CGCGAAGTCT ACAGGCAGCT TGAAAGTGAC 
CTAGCCACGC TATTCAAACT GGTATTTTCC TTCCGAAAGC CAGTAACAGA AGGTGACATA
CGGATCGCAT CCGTCATTTT GCGTAAATGG CTGACCGACG GATTGCTCGG GAAGCTGTGC
AACGCCGCAG GGGTTAAGGC CACTGTCCAA GTACTCGATA ACAGTATCCC ACTCGCCGCA
CTCGCGGAGC ACCCGGCCAT CAACTACTTC CTGACGGCCG GTGTTCGATT CAATGGCGTG
CCGATCTGCG GGATCTACAA TTCTGGAGAT CCGTTTGCGG GCGGACCACA AATTCCAGTC
GATCAAATGC ATGAGCGCGA AATGAGAATT AGTGAATTTC TGGCGCAGAA GCGATTGTAT
TTTGATGGCT CTCTGTTTTC CTGTGCTGAC ATAATAAAAT TCACTGCCAA CAAGCTAGGT
GGCGCTCACT TTGATATGCA GCGTACTCCG AACTACGAAA AGATCGATCA AGCTTCGAAC
TACATGAAGT ACGGTGGGCC CCTTCCCAGT GCAGAGTGGG ATCCGGGGAG TGAAATCTAT
ATGGTTCTAG AGCCGACCAG CAATGAGGTG CTTAGTGGCT TGCATATCGA GATTGTTGCC
GCAGCAACTA CATTCATTCA GATCAAGTTC GACGGAATTC CGATCATGAA ATTGGCGACC
AAGGTGTCCT TGCGGACACG CGCACGGCGG TTACTGGGAT TAGATAGAGC TCGATTTCGT
TTCTTTCAAA ATTCGAAGCC AGATTAA
 
Protein sequence
MALLNKEEEV REVYRQLESD LATLFKLVFS FRKPVTEGDI RIASVILRKW LTDGLLGKLC 
NAAGVKATVQ VLDNSIPLAA LAEHPAINYF LTAGVRFNGV PICGIYNSGD PFAGGPQIPV
DQMHEREMRI SEFLAQKRLY FDGSLFSCAD IIKFTANKLG GAHFDMQRTP NYEKIDQASN
YMKYGGPLPS AEWDPGSEIY MVLEPTSNEV LSGLHIEIVA AATTFIQIKF DGIPIMKLAT
KVSLRTRARR LLGLDRARFR FFQNSKPD