| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3091 |
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| Symbol | |
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| ID | 3974042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3432329 |
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| End bp | 3433216 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637926199 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_532952 |
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| Protein GI | 90424582 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.207365 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGG TCGCCTTTAT CGGGCTCGGC AATATGGGCG GGCCGATGGC CGCCAATCTG
GTGAAGGCCG GGCGCAACGT CGCCGGCTTC GATCTCGTCG CAGCCTCCTG CGCCGCCGCC
AAGGCCGACG GCGTGACCAT CGCGGGCTCG GCCGTCGAGG CGGTGGCCGA CGCGAAAGTT
GTCGTCACCA TGCTGCCCGC CGGCAATCAT GTGCTGGCGG TGTGGGACGA GATCCTGCCG
CGCATCGCTA AAGGCGCGCT GATCATCGAT TGCTCGACCA TCGACGTCGG CAGTTCGATC
CGCGCCCACG CCGCGGCCGC CAAGCACGAG GTCGCCTCGG TGGATGCGCC GGTGTCGGGC
GGCACCGGCG GTGCCAAGGC CGCCACGTTG ACCTTCATGG CCGGCGGCGC GCAGGTCGCG
TTCGATGCCG CCAAGCCGGT GCTCGAACTC ATGGGCAAGA AGATCGTGCA TTGCGGCGGC
CCCGGTGCGG GGCAGGCGGC GAAGATCTGC AACAACATGA TCCTCGGCAT TTCGATGATC
GCGGTCAGCG AGGCGTTCGC ACTCGCGGAA AAACTTGGGC TGTCGCATCA GGCGCTGTTC
GACGTGGCCT CCACCTCGTC GGGGCAGTGT TGGTCGTTGA CCAGCTATTG CCCGGTGCCA
GGGCCAGTGC CGACCTCGCC GGCCAACAAC GACTACAAGC CCGGCTTCGC CGCCGCCTTG
ATGCTGAAGG ATCTGAAACT GTCGCAGGAG GCCGCCAAGG CCGCGGGTGC CGCGACGCCG
CTCGGTGCCC ATGCCGAGGA GATCTACGCG GCGTTCGCCG ACGCCGGCCA CGGCGGGACG
GATTTTTCGG GGATCATCAA CTATCTGCGC GGGCAGGCGG GGACGTGA
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| Protein sequence | MSKVAFIGLG NMGGPMAANL VKAGRNVAGF DLVAASCAAA KADGVTIAGS AVEAVADAKV
VVTMLPAGNH VLAVWDEILP RIAKGALIID CSTIDVGSSI RAHAAAAKHE VASVDAPVSG
GTGGAKAATL TFMAGGAQVA FDAAKPVLEL MGKKIVHCGG PGAGQAAKIC NNMILGISMI
AVSEAFALAE KLGLSHQALF DVASTSSGQC WSLTSYCPVP GPVPTSPANN DYKPGFAAAL
MLKDLKLSQE AAKAAGAATP LGAHAEEIYA AFADAGHGGT DFSGIINYLR GQAGT
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