| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3079 |
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| Symbol | |
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| ID | 3972900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3411251 |
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| End bp | 3412153 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637926187 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_532940 |
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| Protein GI | 90424570 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.149584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0381152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCA CACTCAAGCA GATCGAAGCG CTCCACTGGG TGGTGCAGCT CGGCACCTTC
GATCGCGCCG CCAATCGGCT GCACACCAGC CAGTCCGCCG TATCGAAGCG GATCATGGAG
CTGGAGGCCG CGGTCGCGGT GCCGATCTTC GACCGCAGCC AACGCGGCGC GCGGTTGACC
GAGCAGGGCG AGCATCTGCT GGCGCTCAGC CAGGACATGC TCAACCTGCA GGATCGCATC
ATGGCGCTGA AGGACGCCGG CACCATGCCG GCGCGTCGCC TGCGGCTCGG AATTACCGAA
CTGTCCGCGC TGACTTGGCT GCCGCGGCTG ATTTCCGTGC TGCGCGAGAC GTTTCCGACG
CTGGATATCG AGCCGGACGT CGACACCAGC CGCGATCTTT ACGCGCGGTT GCAGGAGGAT
GAACTCGACC TGATCGTGAT CCCGGAATGC TTCGTCGATC CGGAGATCAC CTCCGACCGC
TTGGCTGAGG TCGCCAACGT CTGGTTCGCG CGGCCCGGCC TGATCAAGTC CCGCCGCGCC
CTGACGCTGG AGGAGCTCGC GACCTATCCG GTGCTGATTC AGGGCCGTCG TTCTGGCTCG
GGCCTGTTCG TCAACAAATG GCTGAAATCG CAAGGGGTGG TGTTTCCGCG GGTGCTGTCC
AGCGACAATC TGACGACCGT GCTGGCGTTG GCGGTGGCCG GGCTGGGGAT TGGATATCTG
CCGCGGCAAT GTTTCCGAAC CATGGTGGCG GAAGGCAAGT TGGTCGCGGT ACCGACGAAA
CCCGCGCTGC CGCTGGTGCC TTACTCGGCG ATGTATCGCA ACGATCGCCC GTCGATGTTC
ATCGCCAAAG TCGTGGAGAT CGCCAAAGAA GTCTGCGATT TCTCCGTGCA ATTTCAGGCC
TAA
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| Protein sequence | MAITLKQIEA LHWVVQLGTF DRAANRLHTS QSAVSKRIME LEAAVAVPIF DRSQRGARLT
EQGEHLLALS QDMLNLQDRI MALKDAGTMP ARRLRLGITE LSALTWLPRL ISVLRETFPT
LDIEPDVDTS RDLYARLQED ELDLIVIPEC FVDPEITSDR LAEVANVWFA RPGLIKSRRA
LTLEELATYP VLIQGRRSGS GLFVNKWLKS QGVVFPRVLS SDNLTTVLAL AVAGLGIGYL
PRQCFRTMVA EGKLVAVPTK PALPLVPYSA MYRNDRPSMF IAKVVEIAKE VCDFSVQFQA
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