| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3077 |
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| Symbol | |
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| ID | 3972898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3408668 |
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| End bp | 3410038 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637926185 |
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| Product | major facilitator transporter |
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| Protein accession | YP_532938 |
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| Protein GI | 90424568 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.374174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0107759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCAC AATCTCAAGC CAGCCGATAT CGCTGGATCG TGCTCCTGCT GATCTTCTTG
TGCTATATGA TTGCCGGCGC TGACCGAGCG AATATCGGCG TTGTCGTGCC CTTCATGAAG
AAGGAGTTCG AACTCAGCAA CACCGACATC GGGGCGATGG CGAGCCTGTT CTACCTTGGC
TATGCCTTCA TCCAGGTGCC GGTCGGACTG CTGTACGAGA AATTCGGCGT GCGGCGCATT
TTTACCCTCG CCATGGTGGC GACGTCGTTT TCGACATTGT TTATCGGCTT CGCGCACAGT
GCCTTTCAAT TGAAGCTCGG CCGAGTGCTG CTCGGCCTGG CGGAGGGGCC GATCAATATC
GGCATTCTGA CCATCATCAA TCGCTGGTTC CCGCCGCATG AGAAAGCGAC TGCGGTCGGC
GTGTTCATGT CGTCGATCAA ATTCGCCCCC GCGGTGGTGC CGCCGCTGTG CGCGTTCATC
ATCTACGCGT TCGGCTGGCG CGAGGTGTTC TACATCTTCG CGATACCCGG GGTGTTCATC
GCCGCCTTCT GGTTCTTCTC GGTCAGTGAC GACCCGCGGG ACAGCCGGTT CGTCAATGCC
GAAGAGGTCG CCTACATCGA GTCGACCGCG GTTGCGGGCG TCAACGAGGG CGCCGAGGGC
GCCAAGGCCC GCGCGGCCTG GCCCATTCTG GACCGGCTGA TCCTGGCGCG GGATATCCAG
CCGCTTGCCA GCAACGCCGC GATTTTCCGG TCGTGGAACG TGTGGGGATG CGCGCTCGGA
TACGGCTTCA TCGTCGGTGT CGCCTACGCC ATCATGACAT GGGTGCCGAC CTATCTGATT
TCGGTGAAGC ACTATCCGCT GTTTCAGATG GGGTTCGTTG CGGCGACCCC GTGGGTCGGC
GCGATCATCG GCAACCTGAT CGGCGGCGTG TTGTCGGACA AGCTGTTTGA AAAGCGCCGC
AAGCCGGTGA TGATCCTGAC CGCGTCGTCA ACGGTTGTGA TGATGTACGC GCTGATCTAT
TCGCCGGGCG AGCCGTTCCT GCTCGCGGCG TTGTTCATCG CCACCGGCGT GCTGCTGAAC
CTCGGCTATT CGACCTTCCT GGTCTATCCG ATGGGACTGG TCGCCAAGGA CAAGGTGCCG
CTGGCCGCGG CCATCGTCAA CACCGTGGGG TCGCTCGGCG GTGCCTTTGC GCCGTTCGTT
GTCGGCATGA TCCTGGATCG CTACAGCTGG GACATGGTGT TCGTTTTTCT GGCGGCGTCA
TCGCTCGCCA CCTTGGTGCT GGTTCTCACC ATTATCGAGC CGATTGCTCT GCCTCGCCAA
GCTTCCGCCG CTCCGGTAAA GGATCTGCCG CGCGCCCAGG TTGTGTCGTA A
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| Protein sequence | MASQSQASRY RWIVLLLIFL CYMIAGADRA NIGVVVPFMK KEFELSNTDI GAMASLFYLG
YAFIQVPVGL LYEKFGVRRI FTLAMVATSF STLFIGFAHS AFQLKLGRVL LGLAEGPINI
GILTIINRWF PPHEKATAVG VFMSSIKFAP AVVPPLCAFI IYAFGWREVF YIFAIPGVFI
AAFWFFSVSD DPRDSRFVNA EEVAYIESTA VAGVNEGAEG AKARAAWPIL DRLILARDIQ
PLASNAAIFR SWNVWGCALG YGFIVGVAYA IMTWVPTYLI SVKHYPLFQM GFVAATPWVG
AIIGNLIGGV LSDKLFEKRR KPVMILTASS TVVMMYALIY SPGEPFLLAA LFIATGVLLN
LGYSTFLVYP MGLVAKDKVP LAAAIVNTVG SLGGAFAPFV VGMILDRYSW DMVFVFLAAS
SLATLVLVLT IIEPIALPRQ ASAAPVKDLP RAQVVS
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