Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3062 |
Symbol | |
ID | 3973380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3393938 |
End bp | 3395194 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637926172 |
Product | phage integrase |
Protein accession | YP_532925 |
Protein GI | 90424555 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.361431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0996208 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCACTG ACATGGCCAT CAAGAGGCTG AAACCAAAGG ATAAATTATA CAAGGTGGCC GACCGTGACG GTATGTACGT TTCCGTCGCC ACGACAGGCC AAATCACCTT CCGGTACGAC TACCGTCTGA ACGGCCGCCG GGAGACGCTG ACGATCGGCC CCTACGGCCC CGATGGCTTC ACGCTCGCCG AAGCGCGTGA GCGCTGCATC GCGGCCCGCA AGCAGGTGGC GGAGGGACTT TCTCCGGCTC ACGAGAAACA GCGCGACAAG CGGCGCAAGG CCATGGAGCG CAGCTTCGGC GCGGTGAGCG GCATATGGAT CAAGGAAGCG CGCATGGCGG AAAGCACCCG CTCGATGCGC AAGGCCATCC TCGATCGCGA TATTCTCCCT GCCTGGAAGA ACCGCCTTCT GACCGAGGTG ACGCCGGACG ATCTCCGACA GCTCTGCGCC AAGGTGAAGG AGCGCGGCGC CCCTGCAACC GCCATCCACG CCCGCGACAT CGTCAAACAG ATCTTCGCCT TCGCCATCCT GCACGGAGAG AAGGTGCCGA ACCCGGCTGA CGAGGTGGGG CCAGCTTCGA TCGCAACCTT CCAGCCGAAG GACCGGGCGC TGTCGCCGGC CGAGATCAAG ATCATGCTAC AGCAGATCGA GCATGTGCCG ACGCTGCCGA CCATCCGGCT TGGCCTGCGC CTGATCCTGC TCACCATGGT GCGGAAGAGC GAACTGCAGG ACGCCACCTG GGACGAGGTG GATTTCGAGA ACGCCGTCTG GACCATTCCG AAGGAGCGCA TGAAGCGGTC GAAGGCGCAC AACGTCTATC TCTCGCAGCA GTCGCTCGAC ATCCTGATTG CGCTCAAGAC CTGCGCCGGC AATTCGCGCT ACTTGCTGCC GTCCCGTTAT GACGCCGACG CCCCCATGTC GCGCGCAACC TTCAATCGCG TGACCACGGC CGTCGTGGCG CGGGCGAAGA AGGAGGGGCT GCCGCTGGAG CCGTTCACGG TCCACGACCT GCGCCGGACT GGCTCGACGC TCTTGAATGA GATGGGCTTC AACAGCGACT GGATCGAGAA ATGCCTCGCC CACGAGGACG GGCGTTCGTC GCGCGGCGTC TATAACAAGG CAGAGTACGA ACCGCAGCGC CGCCACATGT TCCAGGAATG GGCCGACATG ATCGATGCCT GGGTGAACGG TCAAAAGCGG GCGCCGACGC TGTTGCCGCC GGCGATGGCA TTTATGGGCG GCAAGGGGGA ATGCTGA
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Protein sequence | MLTDMAIKRL KPKDKLYKVA DRDGMYVSVA TTGQITFRYD YRLNGRRETL TIGPYGPDGF TLAEARERCI AARKQVAEGL SPAHEKQRDK RRKAMERSFG AVSGIWIKEA RMAESTRSMR KAILDRDILP AWKNRLLTEV TPDDLRQLCA KVKERGAPAT AIHARDIVKQ IFAFAILHGE KVPNPADEVG PASIATFQPK DRALSPAEIK IMLQQIEHVP TLPTIRLGLR LILLTMVRKS ELQDATWDEV DFENAVWTIP KERMKRSKAH NVYLSQQSLD ILIALKTCAG NSRYLLPSRY DADAPMSRAT FNRVTTAVVA RAKKEGLPLE PFTVHDLRRT GSTLLNEMGF NSDWIEKCLA HEDGRSSRGV YNKAEYEPQR RHMFQEWADM IDAWVNGQKR APTLLPPAMA FMGGKGEC
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