| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3056 |
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| Symbol | |
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| ID | 3973374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3387512 |
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| End bp | 3389011 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637926166 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_532919 |
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| Protein GI | 90424549 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.278904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACAG TGGAGACGGT GGCTCGGATT CGGCGTGAGC ATTTTCTCAA GGGCAAGACG
ATCAAGGAGA TCGCCCGGGA TCTGAGGGTG TCGCGGAACA CGGTCCGCAA GGTGCTGCGG
TCCGGTGAGA CGTCATTCGA GTATGGGCGC GAGGTTCAAC CGCGACGGAA GCTTGGCCGA
TGGACGGCTG AGCTCGATGC ACTGCTTGCA AGCAACGCTG CGAAGGCCGC CCGCGAGCAA
TTGACGCTGA TCCGGATCTT CGAAGAGCTG CGTGGGCGAG GCTATGACGG CGGCTACGAT
GCTGTGCGTC GCTACGCCCG CCACTGGGCC AAAGAGCGAG GCCAGGCGAC GGCCGCGGCC
TATGTGCCGC TGAGCTTTGC GCCGGGAGAA GCCTACCAGT TCGACTGGAG CCACGAAGTC
GTGCTGCTCG GCGGGGTGAC GGTGATCGTC AAGGTCGCCC ATGTCCGGCT CTGTCACAGC
CGCATGCTGT TGGTGCGCGC TTATCCGCGC GAGACGCAGG AGATGGTGTT TGACGCCCAT
GACCGGGCGT TCGCACTGTT CAAGGGGACC TGCGGGCGCG GCATCTACGA CAACATGAAG
ACGGCGGTTG AGACGATCTT CGTCGGCAAG GCCCGTCTTT ACAATCGCCG CTTCATGCAG
ATGTGCAGCC ACTATCTGGT TGAGCCGGTC GCCTGCACAC CGGCGTCGGG CTGGGAGAAG
GGCCAGGTCG AGAACCAGGT CGGCCTGGTG CGCGAGCGGT TCTTTACGCC GCGGCTGCGG
TTCAAGAGCT ATGACGAGAT GAACGCCTGG CTCACCGACA AATGCATCGC CTACGCCAAG
GCGCATCGCC ATCCGGAGTT GACCGAGCAA ACGATCTGGG AGGTATTTGA AGCCGAGCGG
CCGAAGCTCG TCCCCTATGC CGGCCGGTTC GATGGATTCC ATGCGGTGCC GGCATCGGTC
TCCAAGACCT GCCTGGTGCG CTTCGACAAC AACAAATACT CTGTGGCGGC GAGCGCCGTC
GGGCGTCCGG TCGAGGTTCA TGCCTATGCC GACCGTATCG TCATCCGACA GGACGGCCGC
ATCGTGGCCG AGCATCCTCG CTGCTTCGGC CGCGGCGAGA CCAGTTACGA TCCCTGGCAT
TACGTGCCGG TGCTGGCGCG CAAGCCCGGG GCCTTGCGCA ACGGTGCGCC GTTCAAGGAC
TGGGTGCTGC CGGCCGCGAT GGAGCGAGTG CGGCGCAAGC TCGCCGGCGT CGTCGATGGC
AATCGGCAGA TGGTCGACAT CCTCAATGCG GTGCTAACCG ACGGGCTGCC GGCGGTTGAT
GCCGCCTGCG CCGAAGCTGT CGATCACGGC GTTCATTCCG CCGACGCCAT CCTCAACATC
CTGGCGCGCC AGCGCGATCC CACGCCGCCG GCCAACATCC TTACGCCCGC CGCGCTGACA
TTGCGCCACG CGCCGCTCGC CGATTGTGCC CGTTACGACA ACCTGAGGAG AACCGTCTGA
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| Protein sequence | MLTVETVARI RREHFLKGKT IKEIARDLRV SRNTVRKVLR SGETSFEYGR EVQPRRKLGR
WTAELDALLA SNAAKAAREQ LTLIRIFEEL RGRGYDGGYD AVRRYARHWA KERGQATAAA
YVPLSFAPGE AYQFDWSHEV VLLGGVTVIV KVAHVRLCHS RMLLVRAYPR ETQEMVFDAH
DRAFALFKGT CGRGIYDNMK TAVETIFVGK ARLYNRRFMQ MCSHYLVEPV ACTPASGWEK
GQVENQVGLV RERFFTPRLR FKSYDEMNAW LTDKCIAYAK AHRHPELTEQ TIWEVFEAER
PKLVPYAGRF DGFHAVPASV SKTCLVRFDN NKYSVAASAV GRPVEVHAYA DRIVIRQDGR
IVAEHPRCFG RGETSYDPWH YVPVLARKPG ALRNGAPFKD WVLPAAMERV RRKLAGVVDG
NRQMVDILNA VLTDGLPAVD AACAEAVDHG VHSADAILNI LARQRDPTPP ANILTPAALT
LRHAPLADCA RYDNLRRTV
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