| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3046 |
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| Symbol | |
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| ID | 3973364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3373543 |
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| End bp | 3375711 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637926157 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_532910 |
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| Protein GI | 90424540 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.770987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTTGA AGAGTTGGAA AGTCTCGGCG GTCACATTCT CTGTGGTTGC CTCATCGATA
GCAGCCGGGC CGTCACAAGC TCAGACTACG CCCCAGACGC TCGATACGAT TATCGTCACG
CGGCCGGACG AGGTGCGGCA GCGACAGCAG AGGCCCAAAT CGTCCGCAGC CGCCCGCAGC
GCTCGTCGAC AGCAAGCAGT AGGCAGGCCC GCGACTCCGA CCGCTCCCTC GGTGGTAGGA
GTGGCAGAGC CGACGACTCT CAAATCGTCC GGTCAAACGC TCGACAAGGT CGATGCGGGC
GCATCGGTCG CCACCGCGGA ACAACTCCGC CAAAACGACG TCCGATCTAT CGACGACCTT
CCAAAGGTGC TTCCGGGTCT CGTGATCGAG AATCGTGGCA ATCGCGCCTA TGCGAGTTTC
ACCGCGCGCG GCATGTCGTC GCCGGATTAT TACAGCTCGG CGGTGCAGGT GTATATCGAC
GGCGTCCCGC AGGCGACCGC AGCTATGGTG CAGGATCTGG ACAATGTCGA GCGGGTGGAA
TTCTTGCGCG GACCGCAAGG CACGCTGTTC GGCACAAATG CCTACGCGGG TGTGCTGAAC
ATCATCACGC GTCAGCCGCG CCAGAGCACG GCCACGGTCT TCGGAACCGC CGCCAACCGC
CGGTTCGACG GCGGTTTCGC CGCCACCGGA GAGGTGATCA AGGATACGCT GTTCCTCGAC
TTGACGCTCA AGGCGGTCGA TCAGTTCGGC CAGATTCGCG ACAGCAACGG CACCAACGAT
GCGATCGACG GGTCCAAGTC CGTCAACGGA CGCATCGGGT TGCGTTACGC GCCAACCGGT
GGCGCATTCG ATTTCAACGT CTGGGCGCAC CACAACCACT TGAAGTCGAA CGAAGAGACT
GCGATCCTGG ACCAAGACGT TCCGGATCGG ATCTATCGCA GCTCGATTCT GGCGTTCCCG
TACAACGAGA TTGAACGCGA CATTTCGACT GGCGGGTTGA ACTGGAACTA TCGGTTCGGT
GCGTTTACGC TGTCGAGCAC CACATCTTAT CAATACGTCG ATCTGAAGCG AAAATTGTTC
GGCTATCAGT TTCCGGAGAC GACCGGCCTG TTCAACCAGG AGGTCAAGTT GACTTATAAT
GACGGCGGTC GGCTGCGCGC CGTCACCGGC GTCTCGTATC GTGACGGCAC CTTCGAGCGC
GATGCCTATG TCGGCCTGCC GATGCAGAGC GTCAACAAGG TCGATACGCG AAGTGCAGCG
CTGTTCGGCG AGAGCACCTA CGCCCTGACC AACAAGATGG ATTTGACGGT CGGCGCGCGG
GGCAGCATCG ATTGGGCATC AATCGACTTC AGAGGGCTTG ACCTAGCGAC CTATGTGCCG
CTGGCTCTCG CGAACGACGC AGAGTTCACC AGTTTTCAGC CGAAAGTCTC GCTCGGATAT
CAATTGACCG ATCAGGTCAG GGTCTACGGC CTGGTTTCGG AAGGCTACAA GCCAGGCGGA
TTCAATCATG CGGTGTCGTT CGCTGCCGAC GGCCAGGCTT ACAGACCGGA GACGGCCTGG
AACTACGAAA TCGGCACACG TGCGAATTTC TGGAACGACC GTCTACAGTT CTCTGCGGCT
CTTTATCGCA TCGAGTCGAA GGACAAGCAG ATCTATGTTG GCCCGATCGG TTTGCAGGTG
CTGCGCAATG CTGGCGAGGC GACGAGCACG GGTGTCGAAG TCGAGACCAG GATCAGGCCG
ACGGAGCGGC TGACGTTGAC CGCAAATGCC AACTTCGGAC GATCCGAATT CACCGATTTC
GTCGATCCGA TCAGCGGTGT GATCTACAAT GGCAATCGGG TGCCCTACGC GCCGGACGTG
ACCGCTCACC TGTTAGGACG CTACCTGATC GATCAGACGG CGATGGCGGC GGACATCAGT
CTGACAGGCG CGGTGCATTA CTACAGCCAG GTGTATTTCA ACGAGGCCAA CACCTTGGGG
CAGGATGCCT ACGCGACATA CGACCTTGGT CTCGAACTGG CGGTCTATAA AGGGCCGACC
GTCAAGATCT TCGCGCAGAA TCTGACTGAC GTTGTCTACC GGACCAACAG TTTTTCCACC
GGAGGATTGG TCTTGAGCAC GATCGGCCAG GGCAGGCTGT TCGGAGTGTC CACCAGATTC
CAGTTCTGA
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| Protein sequence | MFLKSWKVSA VTFSVVASSI AAGPSQAQTT PQTLDTIIVT RPDEVRQRQQ RPKSSAAARS
ARRQQAVGRP ATPTAPSVVG VAEPTTLKSS GQTLDKVDAG ASVATAEQLR QNDVRSIDDL
PKVLPGLVIE NRGNRAYASF TARGMSSPDY YSSAVQVYID GVPQATAAMV QDLDNVERVE
FLRGPQGTLF GTNAYAGVLN IITRQPRQST ATVFGTAANR RFDGGFAATG EVIKDTLFLD
LTLKAVDQFG QIRDSNGTND AIDGSKSVNG RIGLRYAPTG GAFDFNVWAH HNHLKSNEET
AILDQDVPDR IYRSSILAFP YNEIERDIST GGLNWNYRFG AFTLSSTTSY QYVDLKRKLF
GYQFPETTGL FNQEVKLTYN DGGRLRAVTG VSYRDGTFER DAYVGLPMQS VNKVDTRSAA
LFGESTYALT NKMDLTVGAR GSIDWASIDF RGLDLATYVP LALANDAEFT SFQPKVSLGY
QLTDQVRVYG LVSEGYKPGG FNHAVSFAAD GQAYRPETAW NYEIGTRANF WNDRLQFSAA
LYRIESKDKQ IYVGPIGLQV LRNAGEATST GVEVETRIRP TERLTLTANA NFGRSEFTDF
VDPISGVIYN GNRVPYAPDV TAHLLGRYLI DQTAMAADIS LTGAVHYYSQ VYFNEANTLG
QDAYATYDLG LELAVYKGPT VKIFAQNLTD VVYRTNSFST GGLVLSTIGQ GRLFGVSTRF
QF
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