Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3043 |
Symbol | |
ID | 3973496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 3368916 |
End bp | 3370712 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637926154 |
Product | ABC transporter related |
Protein accession | YP_532907 |
Protein GI | 90424537 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.910106 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGTTG ATCTCGGCTT CGATCTCGCG GGACGACGCG AGCCTCGCCT AAAGCTCGGA TTTGCTCTCG GCGTGGCGTC GGCCTTTTGC GAGGCGCTTC CCTACGTCGA ACTCGCACGC GTCATCGTCG CAATCCTGGC TGGCCAGGCG AGCATCGGGC TGGTGATCGA GGCCCTTGTC GTCGTCGGTT CCGCCACATT TGCGCAGGCC TGGCTGCGGT CGAACAGCAT CGTCGTCAAT TTCGTCGCGA CCTATCGTCT GGTGGCGGAC GCGCGACTCC GGATCGCGGA CCATCTGAGC CGTCTGCCGA TGGGGACGCT CAGCGAAGCG CGACGCTCCT CCATCGCGGA ACTGCTGACG AGTCGCTTCA CGCTCTATCA AGAACTGATC ACCCACGCCT GGGGATTGAC GATCGTCAAC GTTTCGCTGC CGCTGTTCCT GTGGCTGATC ATGTTGTGGG CCTCCTGGCC GCTTGCCTGC ATTGCGGCGG TGATGGTGCC GGTCACGATC ATCGTCGTCC CATGGACATG GCGATTGATC GGCCGGGCCT CGGAACGCGT GCAAGGCGCG CAGACTGACT TGGTCGCCGG ATCGATCGAA GCCATCGAAG GCGCCCGTGA CCTCCGCCAA TTCGATGGCG CGGGACAACG TGCGGAACTT CTCCATCAGA CGATCGACCG CCTCGGGCGC GAACAGCTGC GGCACGAGCT CGCGCCGGCT CCGGCGTTGA TGAGCTTCAA TATCCTGAGC CAGCTAGGCT TCACCATCGC GACCCTGGCG GGAGCGTTTC TGTTGGCGCG GGGCATGCTC GACGTCGAGC GCTTCATCAT GTTTCTCATC GTCGGCGTCC GGTTCGCTCG AGCCCTGGCA GATCTCGGCA TCCAGATCGC CGAACTCCGG GTCGCGCAGA TCACCTTGAC TCAGATCCGC GCACTCGTGC AGTCCACCCC GATGCCGATG CCCGAGACCG GACTGCTTCC GAAAGATGCA TCGATCGCGA TCGAAGGTGT GTCGTTCTCC CATAAGCGCG AGGACGGCCA GGACGTGGTG CTGCGCGACA TCGACGGATT CATCCCTTCG GGGGCCCTGG TCGCGATCGT CGGCCCATCG GGCTCGGGGA AATCCACGCT GGCCCACCTG GTCGGTCGTC TCTGGGACGT CGGCTCCGGC TCCATCCGCA TCGGTGGTGT CGACGTGCGC GAGATGACTT CGGAGGTGCT CTGTCGGACG GTCGCAATGG TGTTGCAGGA TGTCGCGCTG TTCGAAGGAA CGATCGCCGA CAACATCCGA CTCGGCCGTC CGGACGCGAC CGACGCGGAG GTCCAGGCGG TCGCTCGGGC CGCGCGCGCC CACGACTTCA TCGTCGCTTC TCCCGATGGC TACCAGACGA TGCTCAATGC GACCGGCACC GATCTATCCG CGGGAGAGCG CCAGCGGATC TCGATCGCGC GCGCGCTACT GAAAAATGCC AGCGTCCTGG TACTCGACGA GGCGACCGCT CAGGTCGATT TCGAGAACGA AGCCGAGATC CAAGCCGGCC TCGCCGAACT CACGCGAGAT CGAACGGTCC TGTTCATCGC GCACCGCCTC TGGACCGTGA CGGAAGCCGA TGAAATCTGG GTCCTCGACC AGGGCCGGAT CGTCGAGCGC GGCACACATC AAGTTCTGTT GGAGCGGAAA GGCCGCTATC GCGAGCTTTG GGATGCTCAG CAGCAGGCGC GATCCTGGCG CCTGGGCGCC CGTTCAGAAC CCCAGCGTGG TTTAGCCTGC CCGGATCGAT CCGCATCGAG CTCGTGA
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Protein sequence | MIVDLGFDLA GRREPRLKLG FALGVASAFC EALPYVELAR VIVAILAGQA SIGLVIEALV VVGSATFAQA WLRSNSIVVN FVATYRLVAD ARLRIADHLS RLPMGTLSEA RRSSIAELLT SRFTLYQELI THAWGLTIVN VSLPLFLWLI MLWASWPLAC IAAVMVPVTI IVVPWTWRLI GRASERVQGA QTDLVAGSIE AIEGARDLRQ FDGAGQRAEL LHQTIDRLGR EQLRHELAPA PALMSFNILS QLGFTIATLA GAFLLARGML DVERFIMFLI VGVRFARALA DLGIQIAELR VAQITLTQIR ALVQSTPMPM PETGLLPKDA SIAIEGVSFS HKREDGQDVV LRDIDGFIPS GALVAIVGPS GSGKSTLAHL VGRLWDVGSG SIRIGGVDVR EMTSEVLCRT VAMVLQDVAL FEGTIADNIR LGRPDATDAE VQAVARAARA HDFIVASPDG YQTMLNATGT DLSAGERQRI SIARALLKNA SVLVLDEATA QVDFENEAEI QAGLAELTRD RTVLFIAHRL WTVTEADEIW VLDQGRIVER GTHQVLLERK GRYRELWDAQ QQARSWRLGA RSEPQRGLAC PDRSASSS
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