| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3042 |
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| Symbol | |
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| ID | 3973495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3367091 |
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| End bp | 3368926 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637926153 |
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| Product | ABC transporter related |
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| Protein accession | YP_532906 |
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| Protein GI | 90424536 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.915781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCA AAACACCGCA GCTGGCTTCC TCCCAGCCCG AATCGTTCAC CCGGAACGCG
GATCTCGATG CGGACGCGGT GCCGCGCTCC GCTCTACGAG CGCTGTTGGT CGCTCAGGCT
CCGCTTTTGG CGACCGCCGG CGTTCTCTCG CTCCTTTGCG GCGTCCTCGA GTTGCTTCCG
TATTGGCTGA TCTATCGCAT GGTGATCATT CTCATCGGAC CGCAGCCTGA CCTCGGCAGC
CTGATGATAT TCGCCACGGC CATGCTCGCC GCAACAGGCG CGCGCTTCTT GATCGGCGGC
ACGAGCCTGC TCGCATCGCA TGCCGCTGCG TTCCGCGTCT CACGCCGACT TCGCCACGTG
CTGGTTGCCA AGATAGCGGA ACTGCCGATC GGTGCACTCG AAGGCCGCGC CGGAGACTAC
AAGAAGGCGA TTGTGGACGA CCCTGGTGGC CTCGAAGGCT TGATTTCCCA TACCTACCCC
GACGCCATCA CGGGATTGTC GACGACGGTG CTGGGCGCGA TTTTTCTATT GACGATCGAC
TGGCGGATGA CCCTGGTGTC GCTGGCTTTG ATCCCGGTGA GCGTCTACGC CCAGTTCCGG
ATCTTTGGAT CTTATGCTGA GAACGTGACC CGTTGGCACG CCGCCGAAGC TGCGGCGAAT
TCAGGCCTAA TGGCTTATGT TTCTGGATTG GCGACGTTGA AGGCGTTCAA CCGGACCGCG
ACGACGTTGG ATCAGTTGCG CGGATCGATA CACGCCCTCG CCGAGCTTGC CGCCACGATG
ACGCGACGAT CGGCCGGCGC CTATGCCGTT TTCACCATCT CACTGTCGAC TAATCTGCTC
GTCGTGCTTC CGGTCGGAGT TGCATTTCTG CTCAATGGCA TGCTGGATGC GCCCACGCTC
GTTTTATTTT CGCTACTCGG CGCCGCATTG ACGGCGCCGT TGCTCAAATT GTTGATCGCG
ATGTCGTCCT TCGAACGGCA GCGTCAGGGC TGGACCAGAA TTGCCACCCT TCTCGAGCAG
CGGCCGCTTC CTCGATCAAA CGAGCCGGTT CTTCCAGCGC GGTTCGATAT CGCATTCAAG
GCGGTCTCGT TCGACTATGG CGAGAAGCTT GCCCTGCGCG ACGTCACGTT CCACTGTCCC
GCGGGGCGGG TCACTGCGCT AGTCGGACCG AGCGGTGCGG GCAAAAGCAC GCTTCTCGCG
CTCCTCGCCC GGTTTCAGGA GACCGGCTCC GGCTGCATTC AGATCGGCGG CGTCGACATC
CGGCGAATTT CCGATACCAA TCTTCAATCC CTGTTGGCGA CGGTGTTCCA GCGGCCGTAC
TTTTTTACCG GAAGCATCGA CGAGAATCTT CGCGTAGCCT CGCCAGCCGC CGGCGTCGAC
GCTATTGAAC GCGCGCTTTC GGCAGTCAAT CTTTCCGACG TCTTCAAACG ATCCTCCCTC
GGCACCGCGA CGTCGATCGC CGACAGCAGC GCTCGCTTGT CCGGCGGCGA GCGGCAGCGG
CTCGCCATCG CGAGAGCCGC GATCAAGAAC GCCCCGATCC TCCTGCTCGA CGAGGCCACC
GCGTTCGTCG ATCCCGAAAA TGAACTTTCC ATCCAACATG CGCTGTCGCA ACTCGCCGTC
GGACGCACCG TTCTGGTGGT CGCCCACCGG CTTTCGACCA TCGTCGAGGC CGACCAGATC
GTCGTCCTGA ACGCAGGGCG AGTCGAGGCA TGCGGAACGC ACGAAGAGCT GTTGACGTCG
TCAGCCACCT ATCGCCGGCT TTGGGCCGCG CAGTCACGGG CCTCAACGTG GCGACTGCGA
TCTTCGGAAC GTGAGGATTT CGAGTATGAT CGTTGA
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| Protein sequence | MNAKTPQLAS SQPESFTRNA DLDADAVPRS ALRALLVAQA PLLATAGVLS LLCGVLELLP
YWLIYRMVII LIGPQPDLGS LMIFATAMLA ATGARFLIGG TSLLASHAAA FRVSRRLRHV
LVAKIAELPI GALEGRAGDY KKAIVDDPGG LEGLISHTYP DAITGLSTTV LGAIFLLTID
WRMTLVSLAL IPVSVYAQFR IFGSYAENVT RWHAAEAAAN SGLMAYVSGL ATLKAFNRTA
TTLDQLRGSI HALAELAATM TRRSAGAYAV FTISLSTNLL VVLPVGVAFL LNGMLDAPTL
VLFSLLGAAL TAPLLKLLIA MSSFERQRQG WTRIATLLEQ RPLPRSNEPV LPARFDIAFK
AVSFDYGEKL ALRDVTFHCP AGRVTALVGP SGAGKSTLLA LLARFQETGS GCIQIGGVDI
RRISDTNLQS LLATVFQRPY FFTGSIDENL RVASPAAGVD AIERALSAVN LSDVFKRSSL
GTATSIADSS ARLSGGERQR LAIARAAIKN APILLLDEAT AFVDPENELS IQHALSQLAV
GRTVLVVAHR LSTIVEADQI VVLNAGRVEA CGTHEELLTS SATYRRLWAA QSRASTWRLR
SSEREDFEYD R
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