Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3040 |
Symbol | |
ID | 3973493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 3364345 |
End bp | 3365460 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637926151 |
Product | hypothetical protein |
Protein accession | YP_532904 |
Protein GI | 90424534 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGACG CGCTCATCCG CGTATATGCC CTGGCTCGCA AAGAATTTCT CGCCATCCTG AAAGACCCGC GAAGCCGCTT CGGTCTGCTG GTGGTCCCCT TGATTCAATG CCTGCTTTAC GGCTACGCGG CGAGCTTCGA TCTCGACCAC ATCCCCTATG CCGTTCTCGA CCAAGACCGC AGCAATGCCT CGCGGGCTCT GCTCGCTCAC CTCGAAGGTT CCAGATCCTT CAATCGCGTC GGCGATCTCC GACGGGTCGC CGATATCGAG CGCTATATCG ACGATCAGCG AGCCTTGATT GTCATCCATA TTGCACCGGA CTTCAGTCGT CGAATCGACT CCGGCGGATC CGCCACCATC CAGGTAATCG CCGACGGCCG CAATTCGAAT ACCGCGGCGA TCGCTCTCGG TTACGTTAGC GCGATCGTCG ATGCCTTCAA TATCGACTGG GCGAAACGCC GCAGCCTCGT CGACGCACCG ATCCAGATTT CACCGCGGGC TTGGTACAAT CCGAACCTCG AAACACGTTG GTATATGATA CCATCCTTGA TTGGTACCTT AACACTTCTG CAAACCCTGA TGTTGACGGC GATGTCAGTG GCTCGAGAAC GCGAAGAGGG GACGCTCGAC CAGTTGCTGG TCACACCGAT ACGGCCGACC GAAATCATGG CAGGAAAGGC ATTGCCATCG ATTCTTGTCG GTGCGGTTCA GGCTAGTGTG ATCTTCGCCT TGGCGAGATT TTGGTTCGAG ATCCCATTTT CCGGCTCGCT CGTGATGCTC TATGCCGGGC TCGCCTTGTT CCTGCTTGCA GCCGTCGGAA TCGGGCTCGT CGTCTCGTCT GCCACCGCGA CATTGCAGCA AGCGATGCTG TCGTCGTTTG TCCTAGCAAT GCCCTTCGCG CTGTTATCGG GGCTGACGAC TCCCGTGGCC AATATGCCGC CGGTCCTGCA ATATATCAAC GCGATCAATC CATTGCGGTA CGCGATCGAG ATCACCCGCC GGGTCTATCT GGAAGGGGTT GGCATCGATC ATCTCATCCC TGATCTTTGG CCGCTTGCCT TGATAGCTTC GGCCGCGTTG GTCGGCGCAA TCTCGATGTT CAGGAAGTCC TTGTGA
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Protein sequence | MLDALIRVYA LARKEFLAIL KDPRSRFGLL VVPLIQCLLY GYAASFDLDH IPYAVLDQDR SNASRALLAH LEGSRSFNRV GDLRRVADIE RYIDDQRALI VIHIAPDFSR RIDSGGSATI QVIADGRNSN TAAIALGYVS AIVDAFNIDW AKRRSLVDAP IQISPRAWYN PNLETRWYMI PSLIGTLTLL QTLMLTAMSV AREREEGTLD QLLVTPIRPT EIMAGKALPS ILVGAVQASV IFALARFWFE IPFSGSLVML YAGLALFLLA AVGIGLVVSS ATATLQQAML SSFVLAMPFA LLSGLTTPVA NMPPVLQYIN AINPLRYAIE ITRRVYLEGV GIDHLIPDLW PLALIASAAL VGAISMFRKS L
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