| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3037 |
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| Symbol | |
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| ID | 3973490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3360391 |
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| End bp | 3361425 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637926148 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_532901 |
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| Protein GI | 90424531 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.714598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTAG GACTGTCGAT TGGTGGAGCC GTGCTGGCAG CGACACTCGC AGCCTTCGCG
TTGTGGCGTC CCGGATCGGG CGCCTCTCCG TCCGAGCTGG TCTTGTTCGG GAACGTCGAT
CTGCGCAGCA TCGAGCTGGC GTTCAACGGG AACGAACGAA TCACGGCCAT GCTCGTCGAG
GAGGGCAACC GCGTTCGAAA AGGCGACGTG GTTGCGCGCC TCGACACGAG CCGGCTCGAA
CCGAGGGTCG CGCAGGCCGA AGCCCAGTCG GATGCGCAAC GGGCAATCGT CGAGCGCCTG
CGCAATGGCA GTCGGCCCGA GGAAATCGCC CAAGCCAGAG CGAATTTGGA TCAAGCGAAG
GCCGACGCCG ACAACGCACA ACGACAATAC GAACGTAAGA AAAGCCTGCT GAGCAAAGCC
GCGGTGAGCG AGCAGGACTT CGACAATGCC AAGGCCACTG TCGACATCGC CGTCGCGCGG
GTCCGCTTGA ACGAGAGGGC CCTCGACTTG ATCGTGGCCG GGCCACGCCG CGAAGAGATC
AAGCAGGCAG AGGCGCAATT GCGCGCCGAC GATGCACGAC TGGCGTGGCT CCGGCGCGAG
CGTGCTGACG CCCAACTTTT GGCCCCCGCC GATGCAGTCG TTCGCTCCCG GCTCATGGAG
CCGGGGGAGA TGGCGTCGCC GCAAAGGCCT GTCCTATCTT TGGCGGTTCT CGATCCGAAA
TGGGTTCGCG CTTATGTCGG AGAGCCCGAC CTCGGCAAGC TGCGACCGGG AGCCCGCGCG
ACGGTCGAGG TCGACAGCTT TCCGAGCCGG CGCTTCGACG GTTGGATCGG CTTCATCTCA
CCCACCGCCG AGTTCACCCC CAAGGAGATA CAGACCGCGG AGCTGCGCAC GAGCCTCGTC
TACCAGGTGC GCGTGTTCGT TCACGACCCG TCGGACGATC TGCGCCTCGG GATGCCCGCC
ACGGTGCGGC TTTCGCTCGA TCGCGACGGC TCCGCCCGGT CGGCCGACAT GCAGCCAGCG
CGGCTTAGCC CATGA
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| Protein sequence | MRLGLSIGGA VLAATLAAFA LWRPGSGASP SELVLFGNVD LRSIELAFNG NERITAMLVE
EGNRVRKGDV VARLDTSRLE PRVAQAEAQS DAQRAIVERL RNGSRPEEIA QARANLDQAK
ADADNAQRQY ERKKSLLSKA AVSEQDFDNA KATVDIAVAR VRLNERALDL IVAGPRREEI
KQAEAQLRAD DARLAWLRRE RADAQLLAPA DAVVRSRLME PGEMASPQRP VLSLAVLDPK
WVRAYVGEPD LGKLRPGARA TVEVDSFPSR RFDGWIGFIS PTAEFTPKEI QTAELRTSLV
YQVRVFVHDP SDDLRLGMPA TVRLSLDRDG SARSADMQPA RLSP
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