| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3027 |
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| Symbol | |
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| ID | 3973480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3326508 |
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| End bp | 3327782 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637926138 |
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| Product | patatin |
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| Protein accession | YP_532891 |
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| Protein GI | 90424521 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.121062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGGT CCGGATTCAG CTCGACGCCA CTGCTTCGTC TTGCCGCTGT GTTGGTCGTG
GCGTTGTCCT GCGCCGGATG CGCGAGCCTC AACGCGCGCA ATGTTGTGCC GGAGCGACTT
GCCGACGAGG CCGAACTCGC CGGCATGCCC AATATACGCA TCTGGGGAGA CGCCTCGGCC
GCTCCGCAAA TGATCACCCT GCAGCACTCG CCCAAAGCGC GTGCGCTGTC CCGCGCGCGA
GGCGCGGAAG GACAGCAACC GCGGTTCAAC GTTCTGGCGA TCTCGGGAGG TGGCGAGGAC
GGTGCCTTCG GCGCCGGACT CCTGGTCGGC TGGAGCGACG CCGGGACCAG GCCCGACTTC
GACGTGGTCA CCGGGGTCAG CGCCGGCGCG CTCGCCGCGC CTTTCGCCTA TCTGGGGCCA
AGCCGCGACT CTGATCTGAA AGAGGTGTTC ACCAGATACA CCCGAAGCGA GATCTACGAT
CCAGGCATCC TGCCGCTGCT GGGCGGCTCC GGCCTGGTCG ATAGTTCGCC GCTCCAAGGC
CTGATCGCGA GCTACGTCGA CGACCGCTTC CTGCGCGACA TCGCCACCGA GCGCAGGAGA
GGGCGCATCC TGCTGATCGG CACAACCAAT TTGGACGCGC AGCGGCCGGT GCTGTGGGAC
ATGGGACGCA TCGCGATGAG CGGTCATCCG CACGCTCTCA GTCTGTTTCG CAAGATTCTG
CTGGCCTCGG CCTCGATCCC TGGGGTGTTT CCGCCCGTCC ACATCAAGGT GAGCGCCGAG
GGCCGCAATT ACGAAGAGCT CCATGTCGAC GGCGGCGTGA CCCAGCAGGT CTTCGTGCCC
TCCTTGCCAA TGGCAGCCGA CGACCTCGAG GTTCCAGCAC GACGATCGGC ACGGCGGATG
TTCATCATCC GCAACGGGAA GGTCAGCCCC GAGTGGGAGA CCATCGAAGC CGGTGTGTTC
TCGATCTCTC GCCGCTCGGT CTCCACGCTG ATCAAGAACC AGGGCATCGG CGACATCTAC
CGGATCTACG CCAAGGCCCA GGCCGACGGC ATCGACTTCA ACCTCGCGGC GATCCCCTCC
GACCTCGGCG TGAAATGGAC CAAATCGTTC GATCTTTCCT ACATGCGCGC GCTCTACGAC
GAAGGCTATC GCTCTGGCGT ACAAGGCTAT CGCTGGATCA AAACCCCACC CGGCCTGGCG
ACGGCAGCAC GGCCTGCGGT GCCGCCAGTT GCAAAACCTC AAGGGGTGGC AATGTCGACA
GCCGAGCGAC GGTGA
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| Protein sequence | MAGSGFSSTP LLRLAAVLVV ALSCAGCASL NARNVVPERL ADEAELAGMP NIRIWGDASA
APQMITLQHS PKARALSRAR GAEGQQPRFN VLAISGGGED GAFGAGLLVG WSDAGTRPDF
DVVTGVSAGA LAAPFAYLGP SRDSDLKEVF TRYTRSEIYD PGILPLLGGS GLVDSSPLQG
LIASYVDDRF LRDIATERRR GRILLIGTTN LDAQRPVLWD MGRIAMSGHP HALSLFRKIL
LASASIPGVF PPVHIKVSAE GRNYEELHVD GGVTQQVFVP SLPMAADDLE VPARRSARRM
FIIRNGKVSP EWETIEAGVF SISRRSVSTL IKNQGIGDIY RIYAKAQADG IDFNLAAIPS
DLGVKWTKSF DLSYMRALYD EGYRSGVQGY RWIKTPPGLA TAARPAVPPV AKPQGVAMST
AERR
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