Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3023 |
Symbol | |
ID | 3973630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3320043 |
End bp | 3323126 |
Gene Length | 3084 bp |
Protein Length | 1027 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637926134 |
Product | acriflavin resistance protein |
Protein accession | YP_532887 |
Protein GI | 90424517 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.904124 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAACA TCTCCAGTTG GGCGATCCGT CATCCGGTGC CGACCACGAT CCTGTTCGTG CTGTTGACGT TGTCCGGCCT GGTGGGGTTT TCGCAGTTGC GGCTCAACAA CATGCCGGAC ATGGACATCC CCACCGTGAC CGTCACCGTC CGCTGGGCCG GAGCCGCGCC GACGGAGATC GAAACCCAGA TCACGCGATT CATCGAAGAC AGTGTTGCGG GATTGGGCGC CGTCGACCAC GTTCGCTCGA CCATCAACGA AGGCCTGTCG ATGACGATGG TCGAGTTTGC GATCGGCACC GACATCGACC GTGCCAGCAA CGACGTTCGC GATGCCGTCG TGTCGATTCG ATCGAAGCTG CCGCAGGCGG CGCTCGATCC GATGATCCGC CGTGTCGACG CCACCGGGCA GGCCATCCTC ACTTTCGTGG TCGATGCGCC GGGTATGGCC CCCGACGATC TGAGCTGGCT GATCGACAAC GACGTCGCCA AGGCCGCGCT CGCGGTGCCC GGCGTGGCAC GGATTTCGCG ATCCGGCGGC GTCGACGCCG AGATCACGAT CAAGCTCGAC CCCGATCGGT TGATGGGGCT CGGCCTGACG GCCGTCGAGG TTTCCGACCA AGTCAGGGCG CAGACCATCA CCGAGCCGGG CGGCCGCGCG GCGCTGGGCG GAATGGAACA GGCGATCCGC GCGCTCGGAA GCGTCGCGGA CGTCGGGCGG CTCGAGGATC TGCGCATCGC CTTCAGCGAC GGACGCAGCG TCAAGCTCTC CGAGCTCGGC AGCGTCGAGC GATCCTGGGC GGAGCCTCGC CAGAGGGCGA GGCTCAACAA CCGCGAGGTC GTCGGCTTCA ATGTCTATCG CGCCGTCGGC TCCGGCGAGT TCGCGGTGAC CCGCGACGTT CGCAAGCGGA TGGCGGAATT CACCGCAGCT CATCCCGGCG TCCGCATCCT CGAGGTCACC TCGTCGACCG ACGCCGTGGT CGAGGGTTAC GACGCCGCGA TCGAGGCGCT ATGGCTGGGC GGCTTGCTGG CGGTTCTCGT CGTCTGGCTG TTCCTGCGCG ACATCCGCGC GACGCTGATT TCATGCGCGG CGCTGCCGTT GTCGCTGATC CCGACCTTCG CCGTGATGGC TGCGCTGAAC CAGTCGCTGA ACAACATCAC GCTGCTCGCG ATCGCCCTGG TCGTCGGCAT CCTCGTCGAC GACGCGATCG TGGAAATCGA GAACATCGTT CGACATGTTC GGCAATCCGG AAAACGCGTC TACGACGCCG CCATCGATGC GGCCGATGAA ATCGGTCTCG CGGTGGTGGC GACGACGTTC GCGATCATCG TGGTGTTCGC GCCGGTCGGG TTGATGCCCG GCATTCCCGG TCAATTCTTC AAAGCGTTCT CGATCGCCGT CTGCACGTCG GTGTTCTTCT CGCTGATTGT TGCGCGGCTG CTGACGCCTT TGATGGCGGC GTTTCTGCTG AAGGCTAACC ACAGCGAGCA TGGCGAGCCG GCATGGGTTC GGCGCTACAC GTCGATATTA GCCTGGACGC TGCGCCATCG CTGGATCACG ATTGGCGCAG GCGTGGTGTT CTTCGTCGCC TCACTTGCGC TGGTTCCGTC GCTCCCCGCA GACTTCATGC CTGCGGCTGA CCGCGGCCGG TCGGTTGTCA TCCTCGAACT GGCGCCAGGC ACGCCGCTGC AGGACACCGA CGCCGCGACA CAACGCGCCA CGCGGCTGCT GATGGCGCGG CCTGAGGTGG CGTCGGTCTA CGCGGCGCTC GGCACCGAAA CCTCCACGAT GTCCGGCCCA GGCGATCTGT CGACCTCGGT CGGCGACGTG CGACGCGCGA CCGTTACGAT CAACCTCGTG CCGCGCGCCG AACGCGCGCT GTCGCAACAG GCATTCGAGA CTTCGATCGG GCGGCAACTG GCGTCCATTC CCGGCCTCCG GATCCAGCTT GGCGAGGACG GATCATCGGG CGCGAAAATC CAGGTCGCGC TGCTCGGCGA CGACTCCGCG ACGCTCGCCG ACGCAGCCAG GCGATTGGCA CAGGAGATGC GGACGCTGCC GGGATTCCAT CGGGCGCGCG TAGCGAGCAG CTCGGCGAGG CCCGAGCTAC ATATTCTGCC CAAACAGGAC AAGGCGGCAC TGTTCGGCGT GACCACGGCC GCGATCGCCA AAACCGTGAC GATCGCCACC GTTGGCGACA TCGAGCAGAA TCTGTCGAAG TTCAGCCTGG ACACCCGACA GATCCCGATC CGGGTGCTGC TGAACGAGGC CGCGCGCAGC GACTTGTCGC GCCTATCTCT GCTGCAAGTC CCGGCCTTCG AACGCCCGGT GGCATTGGCG TCGGTGGCCG ACATCAGCTT CGGATCCGGC CCTGTGCAGA TCGAACGGAC CGATCGAACT CGCAGCGAAA CCGTCGAAGC GGCGCTGAGC GGGCTCACGG TCGGCGAGGC CGAGAGCGTT GTCGCCAACC TTCCGCTGAT CAGACGATTG CCGGCCGGGA TCGTCTACAA GCCGGAGGGT GACTCCGAAC GAATGCGCGA ACTGTTCGAC GGCTTCAAAC TCGCGATCAG CTCGGCGGTC GTTCTGTTGT TCGTGGTGCT CGCGCTGTTG TTCAATGGCT TCGTGCAGCC CGTCACGATC CTGACCGCAC TGCCGTTGTC GCTCGGCGGC GCGCTCGGCC TGCTGCTGCT GACGAGTACC TCGATTTCGT TGCCGGTGCT GATCGGACTG CTGATGCTGA TGGGGATCGC TGCGAAGAAT TCGATCCTGC TCGTCGAATA CGCCATCGTC GCGCAACGTG ATGGCGGCGT GGATCGCGTG CAGGCTCTGC TGGACGCGGC GCGCAAACGC GCGCGGCCGA TCGTGATGAC CACCGTCGCC ATGAGCGCCG GGATGCTGCC GATCGCGTTT GGCATGGGAG CCGATGCCGA ACGGCGCGCC CCGATGGCCA TCGCGGTGAT CGGCGGCCTG TTCAGTTCGA CGATCCTGAG CCTGGTTTAC GTTCCGGCGT TCTTCACGAT CATGGACGAT CTGTCGTGCT GGATTGCAAA GCTGTTCCGT GGCCGAACGC AGAGGGGAGC ATGA
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Protein sequence | MNNISSWAIR HPVPTTILFV LLTLSGLVGF SQLRLNNMPD MDIPTVTVTV RWAGAAPTEI ETQITRFIED SVAGLGAVDH VRSTINEGLS MTMVEFAIGT DIDRASNDVR DAVVSIRSKL PQAALDPMIR RVDATGQAIL TFVVDAPGMA PDDLSWLIDN DVAKAALAVP GVARISRSGG VDAEITIKLD PDRLMGLGLT AVEVSDQVRA QTITEPGGRA ALGGMEQAIR ALGSVADVGR LEDLRIAFSD GRSVKLSELG SVERSWAEPR QRARLNNREV VGFNVYRAVG SGEFAVTRDV RKRMAEFTAA HPGVRILEVT SSTDAVVEGY DAAIEALWLG GLLAVLVVWL FLRDIRATLI SCAALPLSLI PTFAVMAALN QSLNNITLLA IALVVGILVD DAIVEIENIV RHVRQSGKRV YDAAIDAADE IGLAVVATTF AIIVVFAPVG LMPGIPGQFF KAFSIAVCTS VFFSLIVARL LTPLMAAFLL KANHSEHGEP AWVRRYTSIL AWTLRHRWIT IGAGVVFFVA SLALVPSLPA DFMPAADRGR SVVILELAPG TPLQDTDAAT QRATRLLMAR PEVASVYAAL GTETSTMSGP GDLSTSVGDV RRATVTINLV PRAERALSQQ AFETSIGRQL ASIPGLRIQL GEDGSSGAKI QVALLGDDSA TLADAARRLA QEMRTLPGFH RARVASSSAR PELHILPKQD KAALFGVTTA AIAKTVTIAT VGDIEQNLSK FSLDTRQIPI RVLLNEAARS DLSRLSLLQV PAFERPVALA SVADISFGSG PVQIERTDRT RSETVEAALS GLTVGEAESV VANLPLIRRL PAGIVYKPEG DSERMRELFD GFKLAISSAV VLLFVVLALL FNGFVQPVTI LTALPLSLGG ALGLLLLTST SISLPVLIGL LMLMGIAAKN SILLVEYAIV AQRDGGVDRV QALLDAARKR ARPIVMTTVA MSAGMLPIAF GMGADAERRA PMAIAVIGGL FSSTILSLVY VPAFFTIMDD LSCWIAKLFR GRTQRGA
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