| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2995 |
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| Symbol | |
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| ID | 3973237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3277903 |
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| End bp | 3278766 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637926106 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_532859 |
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| Protein GI | 90424489 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.891675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0342596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGGGT ATTTCACCGA GCGAGGCGAT GAACGGAGGC GTTCATCGCG TTTTGTCGGC
CTGGCCGCGG CCGCAGCCTG GCTGCTGGTG TCGTTGGGCG GGGTGGTCGC GGCCGCCCAA
GAGGGCGACG GCCAAGGCGA TGTCGGTCCC GCTGCGTCGA TTGCGAACGA CGCCGATGTA
GCTCCGGAGG CCGATGTTCC GACGCCTGTG GTATTCGATC CGCCGATCAC GAAGCCGCTG
ACGCAAGCCG ATCTGCCGCC GAAGAGTGTG CTGTTCGGCG GCACCGCTCC GCGACACCTC
AGCATCGCGT TCAGCCGCGA TTGGCGCGCC GGCCGCGACG AATACCGCAG CATTGTCGAG
CGGGAGTCGC TCGCCTTCGG CATACCGCCG GCGTTGCTCG ACGCGGTGAT GGCGGTCGAG
AGTCGATACG ACCCGGCCGT GATCGGCTTG GACGGTGAGA TCGGCTTGAT GCAGGTGATG
CCCGCGACGG CCCGCATGCT TGGCTTCATC GGTAGCGAGG CGCAACTAGC GGTTCCGGAC
GTCAATATCC ATTACGGGGC GAAGTATCTC GCGGGGGCTT GGCGGCTGGC GGGGCAGGAT
CTCTGCACCG CCGCCATGAA ATATCGTGCC GGACACGGCG AGACCCGGTT CTCCGTCCGA
TCGGTGGATT ACTGCATGCG CGTCCGCAAT CATCTGGCCG CGCGCGGCGC CGCGGTCACC
GGCGCGGTGC CGCAGCCCAA CCTTGGTGAG ACGACCGGTC GACGACTTCG CGGTCAACCG
ACGCTTTTCG GCGCCAAGCT CGATTTTGCG GCGCTGAACG CGCGGCTGCG CAGTGTGGCC
GATAAGAATC CCGCGCGCCA TTGA
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| Protein sequence | MPGYFTERGD ERRRSSRFVG LAAAAAWLLV SLGGVVAAAQ EGDGQGDVGP AASIANDADV
APEADVPTPV VFDPPITKPL TQADLPPKSV LFGGTAPRHL SIAFSRDWRA GRDEYRSIVE
RESLAFGIPP ALLDAVMAVE SRYDPAVIGL DGEIGLMQVM PATARMLGFI GSEAQLAVPD
VNIHYGAKYL AGAWRLAGQD LCTAAMKYRA GHGETRFSVR SVDYCMRVRN HLAARGAAVT
GAVPQPNLGE TTGRRLRGQP TLFGAKLDFA ALNARLRSVA DKNPARH
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