| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2962 |
|---|
| Symbol | |
|---|
| ID | 3969961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 3242627 |
|---|
| End bp | 3243130 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637926073 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_532826 |
|---|
| Protein GI | 90424456 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.273789 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCAT TATGGCAGCA TACTGTCATG ATAACATCCG TTTCGCCGCC ATTCGATCAC
CCGGTCAATG CCCTGGTGCT GGAGGTCTTC CGGCTCAATG GCGCCTTGAT TCGCCACGGC
GACGCGCTGG TGAAGCCGCT CGGCCTCACC AGCGCCCGCT GGCAGGTGTT GGGGTCGATC
GCGCACGGCC AGGGCACGTT CTCGGTCGCC CGGCTCGCCG ACAATATGGG CCTTGCCCGG
CAGTCGGTGC AGCGCATCGT CGATGAACTG GCCGCGGCCG AATTGGTGAG CTTTGCGGTC
AACCCGGCGC ACAAGCGCGC CAAGCTCGTG GTGATGACGC CGCGCGGCCA ACGCGTGTTC
GCGCGCGCCA CGCAACTGTG GACGCCGGTC GCCGACGCCC TCGTGACGGG GCTCGACCCG
CGCCAGATCC GCAAGGCCTC GGACACTTTG GCCGCCCTGC GCGGCCGGCT GGACGATCAA
CCCAACGACA GGAGTTCGGA ATGA
|
|---|
| Protein sequence | MLPLWQHTVM ITSVSPPFDH PVNALVLEVF RLNGALIRHG DALVKPLGLT SARWQVLGSI
AHGQGTFSVA RLADNMGLAR QSVQRIVDEL AAAELVSFAV NPAHKRAKLV VMTPRGQRVF
ARATQLWTPV ADALVTGLDP RQIRKASDTL AALRGRLDDQ PNDRSSE
|
|---|
| |