Gene RPC_2962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2962 
Symbol 
ID3969961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3242627 
End bp3243130 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content67% 
IMG OID637926073 
ProductMarR family transcriptional regulator 
Protein accessionYP_532826 
Protein GI90424456 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.273789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCAT TATGGCAGCA TACTGTCATG ATAACATCCG TTTCGCCGCC ATTCGATCAC 
CCGGTCAATG CCCTGGTGCT GGAGGTCTTC CGGCTCAATG GCGCCTTGAT TCGCCACGGC
GACGCGCTGG TGAAGCCGCT CGGCCTCACC AGCGCCCGCT GGCAGGTGTT GGGGTCGATC
GCGCACGGCC AGGGCACGTT CTCGGTCGCC CGGCTCGCCG ACAATATGGG CCTTGCCCGG
CAGTCGGTGC AGCGCATCGT CGATGAACTG GCCGCGGCCG AATTGGTGAG CTTTGCGGTC
AACCCGGCGC ACAAGCGCGC CAAGCTCGTG GTGATGACGC CGCGCGGCCA ACGCGTGTTC
GCGCGCGCCA CGCAACTGTG GACGCCGGTC GCCGACGCCC TCGTGACGGG GCTCGACCCG
CGCCAGATCC GCAAGGCCTC GGACACTTTG GCCGCCCTGC GCGGCCGGCT GGACGATCAA
CCCAACGACA GGAGTTCGGA ATGA
 
Protein sequence
MLPLWQHTVM ITSVSPPFDH PVNALVLEVF RLNGALIRHG DALVKPLGLT SARWQVLGSI 
AHGQGTFSVA RLADNMGLAR QSVQRIVDEL AAAELVSFAV NPAHKRAKLV VMTPRGQRVF
ARATQLWTPV ADALVTGLDP RQIRKASDTL AALRGRLDDQ PNDRSSE